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NBPGR’s genebank dashboard takes a bow

Good to hear 1 that the National Bureau of Plant Genetic Resources in India has a new online “dashboard” summarizing data from its genebank, one of the largest in the world. 2

dashboard

There is a separate PGR Portal for searching the collection, though apparently only on basic characterization data so far. Except for wheat, that is, where you can search for a long list of phenotypic characters.

Clearly lots of work going on lately at NBPGR on getting their data out there. But when will we see them on Genesys?

The trouble with Ipomoea

I think we may have mentioned in a recent Brainfood a “foundation monograph” of the genus Ipomoea in Bolivia, 3 without actually explaining what that is. Well, I’ll let one of the authors do that:

‘We wondered if we might be able to combine some of the speed of a Flora approach with some of the rigour of a Monograph,’ explains Dr Scotland. ‘And we’ve ended up with what we call “foundation monographs”.’ The new approach combines the time-limited approach and short descriptions of the Flora approach with the genetic analyses and fieldwork of Monographs, enabling species to be uncovered quickly, but accurately. Crucially, it borrows content like drawings and genetic analyses, where they exist, from existing studies, in order to avoid duplicating work.

Such work — whether floras or monographs — is largely based on existing herbarium specimens, of course, and a complementary study led by Zoë Goodwin, on which Dr Scotland is also a co-author, has just come out which sets out some of the problems associated with that.

…the team…scoured the records of Ipomoea — a large and diverse genus which includes the sweet potato — on the Global Biodiversity Information Facility database. Examining the names found on 49,500 specimens from the Americas, they found that 40% of these were outdated synonyms rather than the current name, and 16% of the names were unrecognisable or invalid. In addition, 11% of the specimens weren’t identified, being given only the name of the genus. 4

The work of the crop wild relatives mapper is never done.

Brainfood: Camel diversity, Livestock vs wildlife, Tunisian fig diversity, In vitro artichokes, Habanero diversity, Sorghum diversity double, Greek cherry diversity, Barley domestication, Omani bananas, IBPGR collecting, Buckwheat flow

How was this harpago used?

I finally got to see the Feeding the Empire exhibit at the Ara Pacis in Rome on Saturday, and learned a lot about how Rome managed to keep a million people fed most of the time. In one of the display cases, I saw this astonishing implement.

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It was labelled simply Harpago. No explanation, nothing. The word seems to be linked to harpoon, and is translated as “grappling iron” in some places. It also shows up “in insect morphology for the distal end of a genital clasper” and lends its name to spiny sea snails and a plant commonly known as Devil’s claw, Harpagophytum spp.

All of which makes perfect sense. But what on earth does it have to do with the preparation of food?