- Multiplex SSR-PCR analysis of genetic diversity and redundancy in the Philippine rice (Oryza sativa L.) germplasm collection. 427 rice accessions in the national collection with similar names resolve to about 30 unique profiles. I think. The abstract is a little hard to follow, and that’s all I have access to.
- Quantitative genetic parameters of agronomic and quality traits in a global germplasm collection reveal excellent breeding perspectives for Jatropha curcas L. 375 genotypes, 7 locations and 3 years get you quite enough data to plan a decent breeding programme.
- Studies on genetic variation within old Polish cultivars of common oat. Forward into the past.
- Morphoagronomic peppers no gender pungent Capsicum spp. Amazonia. Actually nothing to do with gender. That’s a mis-translation of “genus,” if you can believe it. Paper basically says that Amazonian peppers are really variable, which is not as interesting as it might have been.
- Global Wild Annual Lens Collection: A Potential Resource for Lentil Genetic Base Broadening and Yield Enhancement. The core collection of wild annuals (which is actually a somewhat novel concept) comes mainly from Turkey and Syria, and it’s got diversity that’s not in the cultigen.
- Pigeon pea Genetic Resources and Its Utilization in India, Current Status and Future Prospects. Indian genebank evaluates the ICRISAT core and mini-core. Then does some mutation breeding :)
- Molecular genetic diversity of the pea (Pisum sativum L.) from the Vavilov Research Institute collection detected by the AFLP analysis. Molecular data does not correspond with subspecies nor ecogeographic groupings. Back to the drawing board.
- Characterization of microsatellite markers, their transferability to orphan legumes and use in determination of genetic diversity among chickpea (Cicer arietinum L.) cultivars. Chickpea SSRs are ok for other, less studied, crops too.
- From research to action: enhancing crop yield through wild pollinators. Go wild.
- Integration of phenotyping and genetic platforms for a better understanding of wheat performance under drought. You really need managed environment facilities. Didn’t a paper in Brainfood last week say what you needed was a network of field sites? I guess you need both.
- Wild almonds gone wild: revisiting Darwin’s statement on the origin of peaches. He was not entirely wrong.
- The role of roadsides in conserving Cerrado plant diversity. 70% of species is not bad, I guess. No word on whether that includes wild peanuts, but I suspect yes.
- Do living ex situ collections capture the genetic variation of wild populations? A molecular analysis of two relict tree species, Zelkova abelica and Zelkova carpinifolia. Yes and no. But this is in botanic gardens and arboreta, what about seedbanks? The cerrado people want to know…
Brainfood: Shea diversity, Weedy rice, Old barley, Grassland diversity, Afrikaner cattle, Sudanese baobab, FGR review, Small farmers, Ecological pest management, Andean ag changes, European soil biodiversity, Durum adaptation, Agrobodiversity indicators
- Genetic diversity in shea tree (Vitellaria paradoxa subspecies nilotica) ethno-varieties in Uganda assessed with microsatellite markers. Three geographic populations revealed by SSRs, not much related to the folk classification.
- Malaysian weedy rice shows its true stripes: wild Oryza and elite rice cultivars shape agricultural weed evolution in Southeast Asia. The weed is caught in the middle and swings both ways.
- Farmers without borders—genetic structuring in century old barley (Hordeum vulgare). Nordic barley structured latitudinally, with lots more variation within landrace accessions than now, according to historical specimens.
- The Agrodiversity Experiment: three years of data from a multisite study in intensively managed grasslands. Does increasing plant diversity in intensively managed grassland communities increase their resource use efficiency? No idea, but here’s the data from a huge multi-site experiment. Go crazy.
- Genetic diversity in selected stud and commercial herds of the Afrikaner cattle breed. It’s doing just fine, genetically, despite recent declines in numbers.
- The African baobab (Adansonia digitata, Malvaceae): Genetic resources in neglected populations of the Nuba Mountains, Sudan. Maybe a little more variation in homesteads compared to the wild. Maybe.
- Seeing the trees as well as the forest: The importance of managing forest genetic resources. The first State of the World’s Forest Genetic Resources and the first Global Plan of Action for the Conservation, Sustainable Use and Development of Forest Genetic Resources summarized: exchange, test in common gardens, and be clever with genetics, in breeding, management and restoration.
- Are small family farms a societal luxury good in wealthy countries? Rich countries don’t mind inefficient farms because they look nice.
- DIVECOSYS: Bringing together researchers to design ecologically-based pest management for small-scale farming systems in West Africa. Where do I sign up?
- Ecosystem governance in a highland village in Peru: Facing the challenges of globalization and climate change. Big Dairy doing for Andean crops.
- Intensive agriculture reduces soil biodiversity across Europe. What they said.
- The climate of the zone of origin of Mediterranean durum wheat (Triticum durum Desf.) landraces affects their agronomic performance. 4 main climatic zones, accounting for up to 30% of variation in important evaluation traits. FIGS, anyone?
- Indicators for the on-farm assessment of crop cultivar and livestock breed diversity: a survey-based participatory approach. And only 5 of them too!
Brainfood: Biogeoinformatics, FGR review, Lesser pulses, Slovak orchards, Wheat evaluation network, Iranian olives, Beans & FIGS, Blasted rice, Tibetan pigs, Alpine grass, Development as freedom
- Biogeoinformatics of livestock genomic resources. Don’t forget the “geo” bit. Goes for plants as well!
- Utilization and transfer of forest genetic resources: A global review. They’ve been going on for 200 years, but we’ll need provenance trials and conventional breeding more than ever in the future. Phytosanitary risks involved in tree germplasm movement are now better managed, but the big problem in the future will be Nagoya. Molecular assisted breeding? Meh.
- Genomics and molecular breeding in lesser explored pulse crops: Current trends and future opportunities. We’re mostly still awaiting our jetpacks.
- Orchards as traces of traditional agricultural landscape in Slovakia. About half are left, but they won’t save themselves.
- A wheat phenotyping network to incorporate physiological traits for climate change in South Asia. Local checks significantly earlier than the best CIMMYT can offer. Evaluate the whole genebank?
- Genetic structure of Iranian olive cultivars and their relationship with Mediterranean’s cultivars revealed by SSR markers. The N Iran cultivars are different from everything else.
- Leaf traits associated with drought adaptation in faba bean (Vicia faba L.). Chalk up another success for FIGS.
- Large scale germplasm screening for identification of novel rice blast resistance sources. 289 out of 4246 accessions showed resistance against all five rice blast isolates. The 4246 chosen on basis of “annotated rice blast resistance information” from the IRRI genebank. No word on whether FIGS was considered.
- Genetic Variation of EPAS1 Gene in Tibetan Pigs and Three Low-Altitude Pig Breeds in China. One haplotype seems to be particularly associated with high altitude adaptation. Unclear if that is a really important objective of pig breeding around the world.
- Morpho-physiological variation of Poa alpina L. genetic resources from the Rhaetian Alps, Italy, grown in two altitude-contrasting sites. There was more variation within than among populations, and it’s ok to do seed production for high altitude sites at low altitudes. No word on whether same could be said for alpine pigs.
- Protection of Traditional Knowledge and Origin Products in Developing Countries: Matching Human Rights and IP Protection with Business Development Opportunities. It’s all in the value chain.
Brainfood: Polyculture services, Apple resistance, Clover seed storage, Oil palm diversity, Alternative foods in Italy, Oregano chemicals, Pig diversity, IPR and indigenous people
- Do polycultures promote win-wins or trade-offs in agricultural ecosystem services? A meta-analysis. Yes, at least if the services in question are per-plant yield and biocontrol.
- Susceptibility of apple genotypes from European genetic resources to fire blight (Erwinia amylovora). 3 of 40 were resistant.
- Effect of sulphuric acid scarification on seed accessions of cluster clover (Trifolium glomeratum) stored in a genebank. Potentially disastrous.
- Genetic diversity of the world’s largest oil palm (Elaeis guineensis Jacq.) field genebank accessions using microsatellite markers. 3 groups: extreme W Africa, rest of Africa, Madagascar. Choose parents based on genetic distance, though, not just genetic group.
- Introducing territorial and historical contexts and critical thresholds in the analysis of conservation of agro-biodiversity by Alternative Food Networks, in Tuscany, Italy. Alternative Food Networks can contribute to conservation, but they need context.
- Chemical diversity among different accessions of Origanum vulgare L. ssp. vulgare collected from Central Himalayan region of Uttarakhand, India. 2 chemotypes, the one with higher thymol mainly from higher altitudes.
- Merging Molecular Data for Evaluating Cross Country Genetic Diversity of Pigs. Microsatellite datasets from USA, China and Brazil successfully combined and analyzed together. Should be more of this kind of thing.
- How Are Indigenous and Local Communities’ Rights Over Their Traditional Knowledge and Genetic Resources Protected in Current Free Trade Negotiations? Highlighting the Draft Trans-Pacific Partnership Agreement (TTPA). Indigenous people are generally not given stronger rights over their intellectual property in international instruments compared to non-indigenous people. Rights over IP are in general stronger than over genetic resources.
Brainfood: AnGR in Europe, Almond evaluation, Jatropha hybrids, Emmer to the rescue, Peanut genomics, Chickpea genomics, Aibika diversity, Cacao improvement, Cynodon drought tolerance
- European Gene Bank Network for Animal Genetic Resources (EUGENA). Compare and contrast with crops situation.
- Oil content, fatty acid composition and tocopherol concentration in the Spanish almond genebank collection. A couple of varieties have very high levels. But only a couple.
- Variability in almond oil chemical traits from traditional cultivars and native genetic resources from Argentina. Local cultivars are best. No word on how they relate to the above.
- Development of interspecific and intergeneric hybrids among jatropha-related species and verification of the hybrids using EST–SSR markers. Even biofuels need wild relatives.
- Evolution of wild emmer wheat and crop improvement. “…arguably best source for wheat improvement and future food production…” Largely untapped, though, as yet.
- Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World. Ok, can we start using these now, please?
- Genome wide SNP identification in chickpea for use in development of a high density genetic map and improvement of chickpea reference genome assembly. Ok, can we start using these now, please?
- Aibika (Abelmoschus manihot L.): genetic variation, morphology and relationships to micronutrient composition. DNA, morphology and chemical composition give different groupings for this PNG veg. In general, environment seems to be more important than genetics as far as micronutrients are concerned.
- Broadening the Gene Pool of Cocoa (Theobroma cacao L.) Progenies with Guiana Clones: Establishment and Precocity Traits. That would be the “…recently identified genetic groups with high resistance to black pod diseases.” Progenies with tester clones did really well in Ghana.
- Characterization of Gene Expression Associated with Drought Avoidance and Tolerance Traits in a Perennial Grass Species. 36 genes involved in drought tolerance in Bermudagrass and relative, including for stuff like cuticle wax accumulation, antioxidant defense and dehydration-protective protein accumulation.