Genebanks

July 5, 2017July 5, 2017

ILRI looking for a forages genebank manager

The International Livestock Research Institute (ILRI) seeks to recruit a dynamic Forage Scientist with a keen interest in genetic resources, to head the genebank at ILRI and to manage the composition of tropical and sub-tropical forage collections both at ILRI and the International Center for Tropical Agriculture (CIAT). This is a joint ILRI/CIAT position that will be based at the ILRI campus in Addis Ababa, Ethiopia.

The thinking behind that “joint position” thing is explained in the global forages strategy.

July 3, 2017July 3, 2017

Brainfood: Taste breeding, Cat domestication, ITPGRFA in USA, CWR extravaganza, Ecology & ag, Brassica identification, Biodiversity monitoring, Languages, Species recovery, Benin pigeonpea

Sensory sacrifices when we mass-produce mass produce. You need consumer-assisted selection.
The palaeogenetics of cat dispersal in the ancient world. Two Middle-Eastern sub-populations of one sub-species contributed to domestication, at different times, and the result spread first with agriculture and then aboard ships. But we haven’t changed them in the same way we’ve changed dogs etc. You don’t say.
U.S. ratification of Plant Treaty: benefit sharing ambiguity for plant genomics researchers does not change. But what about genomics data?
Wading Into the Gene Pool: Progress and Constraints Using Wild Species. Introduction to the Special Section on CWR.
Plant ecological solutions to global food security. Introduction to the Special Feature on Ecological Solutions to Global Food Security. The intersection with the above is probably here.
A multiplex PCR for rapid identification of Brassica species in the triangle of U. Now there’s no excuse.
Connecting Earth observation to high-throughput biodiversity data. I don’t see any reason why the same thinking couldn’t be applied to crop diversity.
Linguistic diversity of natural UNESCO world heritage sites: bridging the gap between nature and culture. 80% of Natural WHSs intersect at least one indigenous language.
Overcoming barriers to active interventions for genetic diversity. Embrace the hybrid by focusing on process, not form.
Utilization and farmers’ knowledge on pigeonpea diversity in Benin, West Africa. For some reason, farmers don’t like coloured seeds.

June 30, 2017June 30, 2017

Arise, Sir Daniel

From the Facebook page of the Crop Trust:

Our friends at CIAT inform us that yesterday Daniel Debouck received the Order of Leopold for his 40 years of service to the scientific community. Named in honour of King Leopold I, and awarded by Royal order, this is the highest order of Belgium. We congratulate Daniel, who’s one of the tireless scientists at the front lines of agro-biodiversity conservation. As head of the Genetic Resources Unit at CIAT, he’s made sure the world’s largest bean, cassava and forages collections are safe and available for plant breeders, researcher and farmers to use.

Since its inception, CIAT’s genebank has distributed more than half a million samples from 141 countries to requesters in more than 160 countries. Find out more here.

Well done, Daniel! Great to see the work of another genetic resources scientist being recognized.

Read more about Daniel’s work on a recent CIAT blog post, “On the trail of ancient treasure in Peru.”

June 28, 2017June 28, 2017

Maize for Haiti; but from Haiti?

Good news for hard-pressed Haitian farmers.

The International Maize and Wheat Improvement Center (CIMMYT) has grown 150 tons of renewed, improved maize seed that will be sent to Haitian farmers to help jump-start the country’s seed sector, improve local food security and decrease malnutrition. This will be the largest seed shipment to any country in CIMMYT’s history.

But are there any maize landraces left in Haiti that this much-needed effort will displace? If so, it will be important to collect them. Genesys lists 78 landraces from the country, most at the genebank of CIMMYT itself, collected thus:

Maybe enough. Maybe not…

June 26, 2017June 26, 2017

Brainfood: Banana GWAS, MGIS, Commodification and racialization, Native tree seeds, Tea in China, Potato in China, Indian eggplant, Rapid phenotyping, Ag & environment

Trait variation and genetic diversity in a banana genomic selection training population. You can use easy-to-measure traits as proxies for important but difficult-to-measure traits. Both of which will hopefully end up in…
MGIS: managing banana (Musa spp.) genetic resources information and high-throughput genotyping data. Very cool. So when can we expect the data in Genesys?
Heirloom rice in Ifugao: an ‘anti-commodity’ in the process of commodification. Calling a landrace a “heirloom variety” is just another form of capitalist oppression.
Race, Status, and Biodiversity: The Social Climbing of Quinoa. Not to mention racist.
To what extent are genetic resources considered in environmental service provision? A case study based on trees and carbon sequestration. Clean Development Mechanism (CDM) afforestation/reforestation project design documents are often unrealistic about the chances of sourcing sufficient quantity and quality of seeds of indigenous species.
Diversity analysis on catechin genetic of wild tea plant from Yunnan province. They determine whether a variety is used for green or black tea.
Genetic differences between potato strains introduced from International Potato Center (CIP) and domestic potato resources by SSR molecular markers. The CIP varieties are quite different to the Chinese ones. But we kinda knew that.
SSR marker analysis points to population admixture and continuum of genetic variation among Indian landraces of brinjal (Solanum melongena L.). Brinjal gets moved around a lot.
A high-throughput, field-based phenotyping technology for tall biomass crops. Estimate plant height and stem diameter in sorghum, say, without leaving the office.
Comparative analysis of environmental impacts of agricultural production systems, agricultural input efficiency, and food choice. Better for environment to change dietary habits than production systems.