- Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation. AFLP variation linked to precipitation and temperature across 13 Alpine species.
- Current state of knowledge on indigenous chicken genetic resources of the tropics: domestication, distribution and documentation of information on the genetic resources. There are three relevant databases on chickens, and yet…
- Genetic diversity and parentage in farmer varieties of cacao (Theobroma cacao L.) from Honduras and Nicaragua as revealed by single nucleotide polymorphism (SNP) markers. 70 SNPs enough to confirm 5 morphological groups, but also pick up the odd synonym.
- Molecular diversity and phylogenetic relationships of Pistacia vera, Pistacia atlantica subsp. mutica and Pistacia khinjuk using SRAP markers. The species are pretty good.
- Biofortified, selenium enriched, fruit and cladode from three Opuntia Cactus pear cultivars grown on agricultural drainage sediment for use in nutraceutical foods. It pays to grow prickly pear on crappy soil.
- Hotspots of diversity of wild Australian soybean relatives and their conservation in situ. Looks like it’s Kimberley.
- Community-based alternative breeding plans for indigenous sheep breeds in four agro-ecological zones of Ethiopia. They’re ok, but you do have to keep good records.
- Diverse genetic basis of field-evolved resistance to Bt cotton in cotton bollworm from China. Gene jockeys need to go back to drawing board. No, wait.
- Bioactive compounds and nutritional significance of virgin argan oil–an edible oil with potential as a functional food. Jolly high in just about everything that’s good for you, more research needed, yada yada yada.
Nibbles: Gathering, Tubers, Quinoa, Africa-American heirlooms, Deforestation
- Edible weeds, anyone?
- Nope, Slate says the answer is tubers. And they may have a point.
- But Evo Morales thinks it’s quinoa.
- Meanwhile, Ms. Kimble cultivates her vegetable garden.
- And Luigi enticed by new mapping tool to explore deforestation on Sumatra.
Nibbles: Aquatic mapping, Biofortified millet, Indian agriculture, African agriculture, Restoration, Online flora, Farm Bill, Right to Food, Elk farming, Forestry fellowship, Breadfruit, Foods and climate change
- OBIS maps marine organisms. But does it include this data from China?
- Private sector delivers biofortified millet. But will it make it to the wiki for Indian agriculture?
- New paper by APRODEV and PELUM on why CAADP should follow IAASTD. Glossary not included. And more on African agriculture from Gates. Not like this, though.
- Millennium Seed Bank in ecosystem restoration. And a study on ecosystems that are actually going to require less restoration than others.
- Monsanto supports online world flora. What could possibly go wrong? Meanwhile, in the public sector…
- Olivier de Schutter’s recent Right to Food shpiel for IFPRI. LOTS of words. I guess you had to be there.
- Small-scale elk farming primer. Not as crazy as it sounds, but pretty crazy.
- And if you’re a young scientist, from sub-Saharan Africa, and interested in forest genetic resources, well, here’s a fine forestry fellowship opportunity.
- The Bounty Redux. The whole bringing-breadfruit-to-the Caribbean thing seems to be going more smoothly this time.
- Huffington slideshow on the world’s endangered foods.
Mashing up the Global Forest Disturbance Alert System
So here’s how I’d like that Global Forest Disturbance Alert System I blogged about a couple of day ago to work, eventually. Or even this. Or this, for that matter.
But anyway. Say you’re reading about rattans in West Africa and you get interested in, say, Eremospatha barendii, which is kind of rare and probably perhaps sort of endangered, maybe. So you head on over to GBIF to get a better idea of its geographic distribution, but you come up blank. But then you do some more digging and you realize that there’s a new taxonomic revision, describing in minute detail the morphology and ecology of all the African species, with nice drawings and lists of specimens and identification keys. 1 And, by golly, it has pretty maps too.
Pretty, but unusable. The damn things are in a PDF, not the nice Google Earth files you would have got from GBIF. But the coordinates of all the specimens 2 are given in the text, so you extract them from the PDF and plonk them into Google Maps. It’s the little green arrow in southern Cameroon shown below.
But you also want to know to what extent that area is threatened. So you head on over to the Global Forest Disturbance Alert System and you look at the latest data on where there is forest disturbance happening in Cameroon, which are the little red dots here.
Now you can see if that population of yours is perhaps threatened. Well no, you can’t do that now, not easily, because there’s no way to export the little red dots to Google Maps, or import the little green arrow into the Global Forest Disturbance Alert System. But I’m sure you will be able to do that one day. And then you could actually visit 3.066667 N 10.716667 E, and check out that Eremospatha barendii population, assuming it is still there, what with you spending so long mashing up the data and all, and also ground-truth any disturbance that the Global Forest Disturbance Alert System might have, er, alerted you to; maybe even describe its causes. And annotate the little green arrow and the little red dots with your observations.
Wouldn’t that be nice?
Nibbles: Maize genome, Mapping plants in the US, Sixth extinction, Finding species, Korean dog, IUCN guidelines, Ginkgo evolution, Churro sheep, Malaysian trees, Nutrition training
- Maize diversity sliced and diced to within an inch of its life.
- Mapping invasives sometimes = mapping crop wild relatives. Compare and contrast.
- Red List hits 20,000 species.
- And yet we keep finding new ones, even in Europe.
- Reconstructing a Korean dog breed.
- You too can help IUCN with its genebank guidelines.
- Video history of ginkgos. “Are we watching them as they evolve, or are they watching us?”
- Video history of Navajo sheep. Touching.
- Malaysian forest tree genebank at work. Any ginkgos in it?
- Hurry! You have 2 days to apply for a Training course on Food Systems: From Agronomy to Human Health, in Benin.