- Towards the Understanding of Important Coconut Endosperm Phenotypes: Is there an Epigenetic Control? Maybe.
- Dogs accompanied humans during the Neolithic expansion into Europe. All part of the Fertile Crescent package.
- Genomic Insights into Date Palm Origins. Domesticated in the Gulf region, but in a more complicated way than used to be thought.
- Speed breeding orphan crops. Worth the extra cost.
- Malus sieversii: the origin, flavonoid synthesis mechanism, and breeding of red-skinned and red-fleshed apples. Not just good for pest and disease resistance.
- Can you make morphometrics work when you know the right answer? Pick and mix approaches for apple identification. Good job they differ in colour too.
- Systematic establishment of colour descriptor states through image-based phenotyping. Doesn’t work for brown, though.
- High-throughput method for ear phenotyping and kernel weight estimation in maize using ear digital imaging. And the colour doesn’t matter.
- Amplifying plant disease risk through assisted migration. Making AM great.
- Characterization of a diverse USDA collection of wild soybean (Glycine soja Siebold & Zucc.) accessions and subsequent mapping for seed composition and agronomic traits in a RIL population. One of the parents of the RIL population was a wild accession.
- Plant Responses to an Integrated Cropping System Designed to Maintain Yield Whilst Enhancing Soil Properties and Biodiversity. So far, so good.
- Seed longevity phenotyping: recommendations on research methodology. Ok, now there’s no excuse.
Oh, well, except for the paywall. - Evolutionary and domestication history of Cucurbita (pumpkin and squash) species inferred from 44 nuclear loci. All 6 crop taxa in one clade, and some novel relationships with wild species.
- Value Chain Development and the Agrarian Question: Actor Perspectives on Native Potato Production in the Highlands of Peru. Difficult to penetrate the socio-economic jargon, especially without access to the full text, but I think it’s saying that to understand why some value chains for native potatoes work and others don’t, you have to understand that different players want different things. Which seems kinda obvious so I probably don’t have that right.
- Perception of livestock ecosystem services in grazing areas. Not all bad.
Colonialism & desertification
Brainfood: Climate resilient crops, Food system limits, Phenotyping double, Sweet sorghum, Melon history, Paying4data, Beercalypse, Village chickens, Breeding 4.0, European maize, Brachiaria ROI
- Are agricultural researchers working on the right crops to enable food and nutrition security under future climates? No. Well, kinda.
- Options for keeping the food system within environmental limits. You need to pursue several. Including those discussed above, presumably.
- Deep Learning for Plant Stress Phenotyping: Trends and Future Perspectives. 3D CNN architectures applied to hyperspectral imaging is the future, apparently.
- Dealing with multi‐source and multi‐scale information in plant phenomics: the ontology‐driven Phenotyping Hybrid Information System. You’re going to need a fancy system to keep track to the data from the above.
- Sweet Sorghum Originated through Selection of Dry, a Plant-specific NAC Transcription Factor Gene. Could be applied to other cereals?
- Repeated domestication of melon (Cucumis melo) in Africa and Asia and a new close relative from India. Once was not enough.
- Paying for Digital Information: Assessing Farmers Willingness to Pay for a Digital Agriculture and Nutrition Service in Ghana. Cheaper is better. There’s a shocker. Oh, and women are more careful with their money.
- Decreases in global beer supply due to extreme drought and heat. 32% decrease in consumption in Argentina, 193% increase in price in Ireland. But clearly the authors have never heard of sorghum beer.
- The role of local adaptation in sustainable production of village chickens. Location, location, location.
- On the Road to Breeding 4.0: Unraveling the Good, the Bad, and the Boring of Crop Quantitative Genomics. Beyond breeding on predicted phenotypes, it’s sort of breeding for predicted environments.
- Maize yields over Europe may increase in spite of climate change, with an appropriate use of the genetic variability of flowering time. You don’t even need Breeding 1.0, if you deploy existing diversity optimally.
- Got forages? Understanding potential returns on investment in Brachiaria spp. for dairy producers in Eastern Africa. Definitely worth a flutter.
Brainfood: Emmer & drought, European legumes, Sainfoin, Alpine nomads, American domestication, Cereal domestication, Tree plantations, Garlic breeding, African veggies, African staple breeding, Sugarcane genome
- Genetic contribution of emmer wheat (Triticum dicoccon Schrank) to heat tolerance of bread wheat. It’s considerable.
- Warm Season Grain Legume Landraces from the South of Europe for Germplasm Conservation and Genetic Improvement. Ok ex situ, in situ not so much.
- Onobrychis viciifolia; a comprehensive literature review of its history, etymology, taxonomy, genetics, agronomy and botany. The fall and rise of an orphan forage.
- Interstitial but Resilient: Nomadic Shepherds in Piedmont (Northwest Italy) Amidst Spatial and Social Marginalization. Truly a vale of tears.
- Parallel vs. Convergent Evolution in Domestication and Diversification of Crops in the Americas. Still can’t tell which is more prevalent.
- Whole-Genome Analysis of Candidate genes Associated with Seed Size and Weight in Sorghum bicolor Reveals Signatures of Artificial Selection and Insights into Parallel Domestication in Cereal Crops. 63 seed size genes selected during domestication in sorghum, a significant number of which in maize and rice also.
- A systematic review of the socio-economic impacts of large-scale tree plantations, worldwide. Not a good idea.
- Recent Advances in Sexual Propagation and Breeding of Garlic. Restoration of flowering ability has done wonders for diversity. With diversity poster goodness.
- Core collection of two important indigenous vegetables; Gboma eggplant (Solanum macrocarpon L.) and Jute mallow (Corchorus olitorius L.) in Africa: An important step for exploitation of existing germplasm and development of improved cultivars. Interesting, of course, but I wouldn’t call these core collections. But I won’t complain again if it gets the stuff used more.
- Measuring the impact of plant breeding on sub-Saharan African staple crops. High ROI for the usual suspects. How about the traditional veggies et al., though. Anyway, do readers want more on this paper? Let me know in the comments if you want a full post on the main findings.
- Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L. A lot of the good stuff is in wild-cultivated rearranged chromosomes.
Counting your chickens
A new version is out of the FAO global livestock density datasets, which we have blogged about before. This is the third iteration (GLW3), and it has a reference year of 2010. There’s a paper to give you all the details. ((Gilbert. M. et al. Global distribution data for cattle, buffaloes, horses, sheep, goats, pigs, chickens and ducks in 2010. Sci. Data. 5:180227 doi: 10.1038/sdata.2018.227 (2018).))
But there’s more to come:
Future versions of GLW will differentiate stocks according to production systems for ruminant (meat vs. dairy) and monogastric species (intensive vs. extensive, meat vs. egg production). Higher resolution models ((The current global dataset has a resolution of 0.083333 decimal degrees, or 10 km at the equator.)) for individual countries where the census data can support such predictions will also be produced.
The datasets are also available for download from Harvard Dataverse.