- 94% is the new 75%. Here’s some of the survivors.
- But how many crafts have we lost?
- Win a prize for communicating about sweet potatoes.
- Pre-breeding eggplants using their wild relatives.
- Two waves of cat domestication.
- Svalbard double.
- 350 buck’s worth of apple history.
- 10 cent’s worth of strawberry history.
- Latest newsletter from those nice forages genetic resources conservation folks.
- Bananas good and bad news.
Brainfood: Soybean wild relatives, Durum diversity double, Intensifying livestock, Organic soil, Fodder millet, Brachiaria phylogeny, Use bottlenecks, Another spud, Sclerotinia stem rot, Canola resynthesized
- Characterizing the allopolyploid species among the wild relatives of soybean: Utility of reduced representation genotyping methodologies. Allopolyploids are more than the sum of their diploid progenitors, but also less.
- Genetic Diversity within a Global Panel of Durum Wheat (Triticum durum) Landraces and Modern Germplasm Reveals the History of Alleles Exchange. Modern varieties have a lot of rare alleles, and Ethiopian landraces may be the results of a separate domestication. But I’m not sure you can call this a core collection. Incidentally, genotyped by 35K Affymetrix Axiom wheat breeders array1 at TraitGenetics (Gatersleben, Germany).
- Genome Wide Association Study to Identify the Genetic Base of Smallholder Farmer Preferences of Durum Wheat Traits. Farmers know what they’re talking about. No word on any overlap with above. Incidentally, genotyped on the Infinium 90K wheat chip at TraitGenetics (Gatersleben, Germany). There’s a coincidence!
- The role of livestock intensification and landscape structure in maintaining tropical biodiversity. If we want to keep more livestock while maintaining biodiversity, we should spare forests and avoid using agrochemical inputs. Assuming that dung beetles can stand in for tropical biodiversity as a whole.
- Organic farming enhances soil microbial abundance and activity — A meta-analysis and meta-regression. Especially legumes in crop rotations and organic inputs.
- Identification of promising sources for fodder traits in the world collection of pearl millet at the ICRISAT genebank. From over 300 to about a dozen.
- Genetic Diversity and Population Structure of Brachiaria Species and Breeding Populations. Fancy molecular markers agree with morphology.
- Bottlenecks in the PGRFA use system: stakeholders’ perspectives. Need better policies, capacity and access.
- Solanum jamesii: Evidence for Cultivation of Wild Potato Tubers by Ancestral Puebloan Groups. But does it make good chips?
- Resistance to Sclerotinia sclerotiorum in wild Brassica species and the importance of Sclerotinia subarctica as a Brassica pathogen. Thanks to the U. of Warwick genebank.
- Genetic changes in a novel breeding population of Brassica napus synthesized from hundreds of crosses between B. rapa and B. carinata. Any of them resistant to Sclerotinia?
Nibbles: Visionary edition
- New guy in charge Peter Wenzl gives us his vision for the CIAT genebank.
- Agriculture and Irrigation Minister of Peru gives us his vision for the Peruvian genebank.
- CIMMYT’s annual report gives us a vision of conserving maize in Guatemala.
- Farmer Somashekhara gives us his vision for finger millet farming in India. And two makes a trend…
- Retired agriculture expert Malcolm Hazelman gives us his vision for Samoan gardens.
- A Tagorean vision of radical relocalization involving perennial edimentals.
- Lots of people give us their vision for saving the wild apple.
- IFPRI gives us their vision for the future of food in a changing world. With infographic goodness.
- Natalie Mueller et al. give us their vision for reviving the forgotten crops of the Eastern Agricultural Complex.
- A vision of a planet protected in situ, in multiple ways. Yes, even pigeons. And yes, even cities, though agrobiodiversity neglected as usual.
- A vision of permanent identifiers everywhere.
- DNA gives us a vision of domestication explained. Yes, even sugarcane.
Brainfood: Wild foods, Maize in Guatemala, Wild lentils, Sorghum gaps, Ethiopian erosion, Chikanda barcoding, Brazil nut systems, Wild carrots, Ancient wild potato use, Wild wheat grains
- The role of wild fruits and vegetables in delivering a balanced and healthy diet. Not great, until they’re domesticated.
- Maize Diversity, Market Access, and Poverty Reduction in the Western Highlands of Guatemala. Forget maize.
- Evaluation of Wild Lentil Species as Genetic Resources to Improve Drought Tolerance in Cultivated Lentil. Environment explained drought response in wild lentils better than molecular classification.
- Geographical distribution, diversity and gap analysis of East African sorghum collection conserved at the ICRISAT genebank. Both Sudans.
- Explaining the Ethiopian farmers’ perceptions on potential loss of traditional crop varieties: A principal components regression analysis. Poor farmers know more, and care more, about loss of traditional landraces.
- High-throughput sequencing of African chikanda cake highlights conservation challenges in orchids. Those are very biodiverse cakes, but not in a good way.
- Revisiting the ‘cornerstone of Amazonian conservation’: a socioecological assessment of Brazil nut exploitation. It’s actually in pretty good shape, but that doesn’t mean it can’t be improved.
- Phylogenetic Prediction of Alternaria Leaf Blight Resistance in Wild and Cultivated Species of Carrots. Look for taller material in clade A.
- Starch granule evidence for the earliest potato use in North America. S. jamesii may have been used for 10,000 years in Utah.
- Genome-Wide Association Study of Grain Architecture in Wild Wheat Aegilops tauschii. Two genetic lineages, with big differences in grain width and weight.
The shocking news about breeding for flavour
Luigi linked, with scarcely a comment, to a plant breeding paper by Kevin Folta, scourge of biotech deniers everywhere.
Stripped down, what Folta and his co-author, Harry J Klee, propose is that plant breeders “can now turn to the consumer for guidance in defining critical desires,” by which they mean previously unconsidered trifles like flavour and aroma.
I was going to let it lie – nil nisi bonum and all that – but I just can’t.
The burr under my saddle is not the cutesy metaphor of the Model T Ford, nor the pedantic insistence that tomato is a fruit while strawberry is a vegetable. It is this:
The idea of putting the consumer first is shockingly novel …
To which I can only reply, “Srsly?”.
What about the shockingly novel idea of participatory variety selection, in which participants are encouraging to evaluate sensory traits and even practical matters like preparation and cooking time? What about the Culinary Breeding Network and many other breeders who are already working closely with chefs and other consumers?
Another shocking aspect to the paper is how fundamentally reductionist it is, although that also explains why they think it so novel to consult people who eat fruit and veg, as opposed to intensive farmers and their customers, the usual consumers for reductionist plant breeders. The focus is on relating what consumers say they like to specific levels of specific compounds, and those compounds to specific genes, the better to manipulate them.
There are, I admit, some juicy insights as a result of this approach. It is indeed interesting that in the strawberry vegetable, a few specific genes underly specific different flavours, while in the tomato berry many related genes and metabolic pathways influence flavour, and are under the control of a few regulatory genes. One heirloom tomato is consistently reported as sweeter than a modern variety, even though it contains 10% less sugar. Why? Because it contains “significantly higher levels of certain volatiles … creating the illusion of sweetness in the absence of sugar”. In strawberries, “furaneol and its methyl ether 2,5-dimethyl–4-methoxy–3(2H)-furanone … produces [sic] a rich, buttery, caramel-like aroma” while γ-decalactone – produced by the gene FAD1 – “confers a strong peach essence”.
Folta and Klee conclude by noting that:
Coupling the targets defined by consumer tests to today’s powerful metabolomic and genomic technologies, plus the potential for genome editing, suggests that creating the next wave of highly flavored fruits and vegetables can be streamlined compared with yesterday’s processes of traditional breeding.
It suggests other things, too, but I’ve said plenty.
Syndicated from The Mothership.