- Former CIFOR DG interviewed about Global Forest Watch and more. I would have asked why you can’t import your own data or share a map you make.
- A particularly important place to watch the forest is Honduras, because deforestation there is correlated with cocaine trafficking.
- Not clear from this World Bank piece if deforestation in PNG associated with cultivation of another drug, i.e. coffee.
- Better bananas would be good for forests, wouldn’t they?
- Bah, just let them have corridors, they’ll be fine.
- And don’t forget to eat the forest bugs.
- Ok, I can’t figure out how to fit the history of potato breeding into this narrative. Any of it organic, though?
Nibbles: Brazil agrobiodiversity & nutrition, Chinese mummy cheese, Grey forest literature, ICRISAT chickpea, CIAT cassava & forages, Jamaican cassava
- Brazil revises its National Biodiversity and Action Plan and wants to mainstream biodiversity and nutrition.
- That’s a really old cheese.
- Are you conducting projects testing how the presence of trees affects food production and natural resource management? CIFOR would like to hear from you.
- ICRISAT super-chickpea takes over India.
- And CIAT amylose-free starch cassava to take over Brazil. China next?
- Red Stripe to use cassava. Jamaica? No, they really did want to make cassava beer. Well, come on, things are peachy with cassava bread, why not beer?
Nibbles: Plant Guardians, Peruvian Solanum, Sunflower genomics, California drought, Brazil drought, Sri Lankan tea, Minnesota wine, Seed of Hope, Sugarcane engineering, King Cotton, Rubber boom
- Do you want to be a Plant Guardian?
- Some people are already getting busy guarding Solanum in Peru.
- The sunflower family gets a molecular makeover.
- What the California drought means for food.
- And the one in Brazil for coffee.
- And tea in Sri Lanka is also in trouble, though for once drought is not to blame.
- Minnesota has a wine industry thanks to wild relatives. But I won’t hold that against them.
- In today’s Seeds of X story, X=hope and the place is Aceh.
- If sugarcane was a cold-tolerant oil-producing crop, would it still be sugarcane?
- Cotton has a lot to answer for. Or rather, the people who grew it do. Or did. Oh crap.
- Rubber too. Though not as much. I guess. Oh crap.
Brainfood: Weird coconut, Rainforest management, Pollinators and grazing, Pre-Mendel, Italian grapes, Indian fibre species, Cereal relatives, Brazil nut silviculture
- Scope of novel and rare bulbiferous coconut palms (Cocos nucifera L.). Produces bulbils instead of floral parts.
- Holocene landscape intervention and plant food production strategies in island and mainland Southeast Asia. Like the Amazon.
- Grazing alters insect visitation networks and plant mating systems. More outcrossing in grazed birch woods.
- Imre Festetics and the Sheep Breeders’ Society of Moravia: Mendel’s Forgotten “Research Network.” Before peas, there were sheep.
- Genetic Characterization of Grape Cultivars from Apulia (Southern Italy) and Synonymies in Other Mediterranean Regions. About half are also grown somewhere else.
- Fibre-yielding plant resources of Odisha and traditional fibre preparation knowledge − An overview. 146 species, no less.
- Functional Traits Differ between Cereal Crop Progenitors and Other Wild Grasses Gathered in the Neolithic Fertile Crescent. How do cereal progenitors differ from all the other grasses our ancestors used to eat? Adaptation to competition and disturbance. They were weeds, basically.
- Testing a silvicultural recommendation: Brazil nut responses 10 years after liana cutting. Biodiversity bad for Brazil nuts.
CGN18108 it is
Simon Foster very kindly took the trouble to post a comment setting the record straight on the source of that blight gene:
Apologies, a previous tweet from ourselves erroneously confirmed the accession as CGN18000. It is in fact CGN18108 which is still listed in the database as Solanum okadae (was subsequently found to be S. venturii in DNA fingerprinting studies).
The origin of Rpi-vnt1 is detailed in the original research paper describing the cloning and characterisation of the gene and which is cited in the Roy. Soc. paper published yesterday. All acknowledgement of sources was published in that paper.
Foster SJ, Park T-H, Pel M, Brigneti G, Sliwka J, Jagger L, van der Vossen E, Jones JDG. 2009 Rpi- vnt1.1, a Tm-2(2) homolog from Solanum venturii, confers resistance to potato late blight. MPMI 22, 589 – 600. (doi:10.1094/MPMI-22-5-0589)
Here’s the relevant bit of that paper:
Accessions of S. venturii and S. okadae were obtained from the Centre for Genetics Resources in Wageningen, the Netherlands (CGN) (Table 1). The S. venturii accessions were originally listed as S. okadae in the CGN database but have recently been reclassified based on work using amplified fragment length polymorphism (AFLP) markers to study the validity of species labels in Solanum section Petota (Jacobs 2008; Jacobs et al. 2008).
So my apologies to Dr Foster. There is indeed a very full and proper acknowledgement of the source of the gene in the earlier paper. However, I do still think that it would not really have taken much effort to also include an acknowledgement in the later paper. The confusion over which accession was actually used that I fell into, admittedly without taking the trouble of following the references, is evidence of why it’s important to do so.
Now to suggest to CGN that they may want to change the species name of CGN18108 in their database…
LATER: Just realized we started talking about all this quite a while ago.