- Concentrating management practices on conserving a particular plant species may have bad consequences for other bits of biodiversity. Lessons for crops wild relatives?
- Benin’s farmers ennoble wild yams.
- A Lebanese lunch is an educational experience. Right.
- Paddyomics video. Nothing to do with the Irish. It’s about how IRRI is automating, er, everything about its phenotyping.
- Tamarind’s environmental niche is, in fact, er, niches?
- Different wheat genomes generate distinct protein profiles.
- Phylogenetic relationships of a new Mediterranean lupin.
- Betel nut chewing endangers coral. Kinda. Traditional and all that, but an unpleasant habit nonetheless.
- Our friend Bhuwon and others tell the story of the participatory improvement and formal release of Jethobudho rice landrace in Nepal.
- CGIAR elicits comment on the Agriculture for Improved Nutrition and Health megaprogramme. Until August 1.
- Bacterial diversity boosts maize yields.
Looking for leimotifs in the early history of wheat and rice
There are two papers out just now which review in detail archaeobotanical and genetic data to elucidate the early history of crops. Dorian Fuller and numerous co-authors do it for Asian rice (Oryza sativa) 1, Hakan Özkan and others do it for emmer wheat (Triticum dicoccoides). 2 And Fuller actually also comments on the emmer paper on his blog. 3
In such situations, my first instinct is to look for commonalities, rather than get lost in the specifics. 4 Certainly, the occasional difficulty of reconciling archaeobotanical and genetic data comes up in both reviews. Actually there’s a third paper out which looks at that too, suggesting that “genetic and archaeological studies represent complementary perspectives on domestication, each highlighting a different facet of this complex problem.” 5 Complexity is a word that recurs a lot, in fact. Here’s Fuller: “Asian rices have had a complex history.” And here’s Özkan: “The spread of domestic emmer would have been extremely complex…”
But the really interesting question to me is whether there are similarities within the complexity. As Tolstoy might have asked, are the early histories of different crops complex each after their own fashion? Fuller summarizes the emmer story as one of “multiple starts of cultivation, gradual domestication, but the possible predominance of one domesticated line at the end of the process,” and there certainly are some echoes of that in rice. But I want to focus on one little series of events or processes that occurs in both rice and emmer, in each case with its peculiarities, but nevertheless comparable.
Cultivated emmer (Triticum dicoccon) was developed from its wild progenitor (T. dicoccoides) in south-eastern Turkey. 6 It then spread to the north-east, where it came into contact with wild Aegilops tauschii. Somewhere in the corridor between Armenia and the Caspian Sea, hybridization between the two gave rise to hexaploid bread wheat from tetraploid emmer. Well, something kind of similar also happened in rice. Fuller’s paper has a nice diagram summarizing the relationship between japonica and indica rices. Simplifying wildly, japonica arose in China from wild Oryza rufipogon. It was then taken to India, where it came into contact with cultivated proto-indica rices and also the wild species from which that was derived (O. nirvana). Hybridization and back-crossing eventually led to fully indica varieties. A crop develops in one place, then moves somewhere else, where it interacts with something, leading to the development of a somewhat different crop.
Now, I’m not sure whether the differences in this process, in particular the fact that polyploidy was involved in the emmer case but not rice, are more important than the similarities. But I wonder if the domestication and spread of crops can perhaps be broken down into a series of similar tropes, or maybe leitmotifs, I’m not sure what one would call them. At the very least it might help people like me make sense of — and try to remember, and keep straight — the complexities.
Nibble: Conservation ag, Sahelian famines, Homegarden fertility, Annals of Botany news roundup, Carrot geneflow, Cyanide in crops, Texas rice breeding
- “…conservation tillage in Europe may indeed have some negative effect on yields, [but] these effects can be expected to be limited: the overall average reduction we found was ca. 4.5%.” Well I guess it’s good to have the data.
- Today’s solution for the Niger famine is fertilizer micro-dosing. I kid you not. But you should read that first link.
- Homegardens good for soil fertility. Well I guess it’s good to have the data.
- Nigel Chaffey’s Plant Cuttings. Priceless.
- “High outcrossing and long-distance pollen dispersal suggest high frequency of transgene flow might occur from cultivated to wild carrots and that they could easily spread within and between populations.” Transgenic carrots? Well I guess it’s good to have the data.
- Kenneth Olsen interviewed on cyanide in plants. Nice enough, but you read about this stuff here first.
- “Rice breeders seek yield advantage.” Do they now.
Nibbles: Wetlands, Cucurbit phylogeny, Herbology, Malnutrition, Fungi, India, Livestock, Ug99, Madagascar, Beer
- Conserving dambos for livelihoods in southern Africa. How many CWRs are found in such wetland habitats around the world, I wonder.
- Cucumis not out of Africa.
- Exploring “the connection between traditional knowledge of herbs, edible and medicinal plants and media networked culture.” And why not.
- PBS video on malnutrition.
- Fungal exhibition at RBG Edinburgh.
- Indian Council on Agricultural Research framing guidelines for private-public partnerships in seed sector. That’ll stop the GM seed pirates.
- Conserve African humpless cattle! They’re needed for breeding.
- UG99 — and crop wild relatives — in the news. The proper news. The one people pay attention to.
- Vanilla lovers better start stocking up.
- Kenyan farmers earning money selling sorghum to brewers. What’s not to like.
Conserving crop wild relatives in situ is hard
Our friends at Bioversity International have a nice piece on IUCN’s website summarizing their work on in situ conservation of crop wild relatives with over 60 partners in five countries around the world. I liked the general tone of understatement: “What became obvious from the project’s outset was that the in situ conservation of CWR is not an easy task and cannot be achieved alone.” The practical lessons of the project have been brought together in a manual.
The piece also includes a trenchant quote from a recent IUCN publication: 7
In general, the idea that the conservation of agrobiodiversity is a potentially valuable function of a protected area is as yet little recognised. For example, it would appear from the case studies that it hardly ever appears explicitly in protected area legislation, and rarely in management plans. Indeed, a study by WWF found that the degree of protection in places with the highest levels of crop genetic diversity is significantly lower than the global average; and even where protected areas did overlap with areas important for crop genetic diversity (i.e. landraces and crop wild relatives), little attention was given to these values in the management of the area (Stolton et al 2006).