Will Ecuador benefit from wild tomato genes?

A tweet alerted me to a story about the value of genes in crop wild relatives.

The source headline is “Galapagos tomato provides key to making cultivated tomatoes resistant to whitefly,” and though it reads like a press release 1 I have so far been unable to run down the original. I did, however, locate the event of note.

By now, Syarifin Firdaus should have successfully defended his graduate thesis on Whitefly Resistance In Tomato and Hot Pepper, which was due to take place today and which I imagine created all the interest.

My interest stemmed from the Twitterer’s question: “Will Ecuador benefit?”

The blurb for Firdaus’ talk makes it clear that after sampling almost 100 genebank accessions, wild Solanum galapagense had the strongest resistance and this seemed to be down to a single gene on chromosome 2. But it also pointed out that resistance was found in two other wild Solanum species, and in several Capsicums.

With these results, introduction of the resistance into modern tomato varieties is feasible and within a few years the first commercial, resistant tomato cultivars are expected on the market.

And that is a good thing not so much because whitefly damage the crop, but because they transmit virus diseases that are really harmful.

The release, which lists all the private sector companies involved in the research, strongly suggests that it will be genes from S. galapagense that will be bred into commercial varieties “within two years”. It also says that “resistance was also found in China, Indonesia and Thailand,” presumably in local tomato varieties rather than wild relatives.

Will Ecuador benefit? I seriously doubt it. Other wild relatives from Ecuador (and elsewhere) have already donated genes worth millions of dollars to the tomato industry, and no precedent has been set.

Should Ecuador benefit? Hard to see why. It isn’t as if S. galapagense (which until relatively recently was treated as a form of S. cheesmaniae, a well-established source of good tomato genes) has been maintained by farmers since time immemorial.

Best yet, tomato isn’t even listed on Annex 1 of the International Treaty on Plant Genetic Resources for Food and Agriculture. Solanum section tuberosa, sure; Solanum melongena, you bet. But Solanum lycopersicum and its wild relatives, outta luck.

Of course, the genetic resource in question might just be covered by the Convention on Biological Diversity, which offers Ecuador and its supporters a glimmer of hope, but I wouldn’t hold my breath.

What I really want to know is why S. galapagense is resistant? What are the insect pests on the Galapagos that exerted such strong selection pressure? Perhaps @WayOfThePanda can find out.

The glories of the harvest

The Big Picture, a wonderful round-up of great photographs hosted by The Boston Globe, takes a look at the harvest.

Wheat being harvested.
Wheat grain is poured into a truck on a farm in Great Wilbraham, United Kingdom on July 18, 2012. (Simon Dawson/Bloomberg)

Harvest is a time of plenty, when the season’s hard work is rewarded by bounty. Many of the rhythms of our lives are shaped by the gathering of crops, even if most of us now live in cities. Worldwide, festivals and rituals mark the passage from growing season to harvest, with indigenous and popular practices making fall in the Northern Hemisphere a festive time. This year sees a reduced harvest in much of the world as extreme weather decimated many regions. Half of the United States is in prolonged drought, as well as much of Europe. In India, the monsoon is 20 percent off the annual average. Food prices are expected to rise by 2013 as demand taxes supplies, and later the price rises will transfer to the meat industry as costs of feed for livestock are passed on. Gathered here are images of farms industrial and traditional, crops critical and obscure, and harvest festivals among drought and bounty.

All the images are just stunning, and a reminder of both the similarities and the differences of cultures around the world.

Featured: Microsoft

Cédric Jeanneret has a lot of questions on the IUCN-Microsoft partnership on Red Lists. Here’s a couple to be getting on with:

What and where are Microsoft’s GIS/spatial analysis know-how and capacity? No doubt its Computational Ecology and Environmental Science team could create an excellent geo-analysis tool in no time, but should we expect another, MS-proprietary geo-file standard? Probably not-so-proprietary, since Microsoft and ESRI are long-time partners, and certainly that partnership had something to do with the MS-IUCN collaboration. This then gives some sense to the new partnership. Most certainly a greater part of the SSC experts use ESRI software, so why not deal with ESRI directly and its arcgis.com platform? One reason could be that the ‘Red List’ is bigger than ESRI, so big so that only a corporation like MS could handle the data and queries.

Read them all.

What’s wrong with this picture?

Slideshare is a great resource, but I’m always slightly worried I might be missing something. Take, for example, the presentation on the barriers to adoption by Haven D. Ley, just shared by the Borlaug Global Rust Initiative. In particular, look at the seventh slide. It includes this diagram:

No reference to genebanks? Really? But, who knows, maybe the presenter mentioned the need for an occasional influx of novel diversity, and the best source for that, in their verbal comments on the slide. Or made the point that the diagram is necessarily a simplification. Or even that this is an illustration of how NOT to do breeding. I’d be interested to know what our breeder readers think of this diagram as a representation of their trade.

IUCN and Microsoft map threats to biodiversity

“We’re building an application that allows people to map those threats spatially,” Joppa explains. “We’re trying to provide a repository of evidence for threats to species.”

Lucas Joppa is talking about a collaboration between Microsoft and IUCN to map threats to biodiversity. Worth keeping an eye on. But I wonder if they’ll consider agrobiodiversity too. If so, we have some ideas here at the blog. Anyway, presumably the thing will link up with GeoCAT in some clever way.

LATER: And also link to this? Or at least suck in the data?