Agricultural Biodiversity Weblog
Agrobiodiversity is crops, livestock, foodways, microbes, pollinators, wild relatives …
Today is Day of Archaeology 2011 and a whole bunch of archaeologists are going to tell you about their day using social media. I bet many of them are digging up the remains of farming communities and studying the origins of agriculture. A great idea. How about A Day in the Life of a Genebanker next? Via.
The talk that Jacob is planning to give later today at the National Geographic store in Madrid (and you can follow online) is now available on Slideshare.
LATER: I forgot to use a hashtag, but you can see my live-tweeting of Jacob’s talk by searching for his name. Maybe Jacob can tell us if the video will be available in due course. And no, he didn’t answer my online question about the difference between oca and potato. Wimp.
Our regular reader and occasional contributor Eve Emshwiller informs us that her student Brian Walsh has won the award for best student poster from the Economic Botany Section of the Botanical Society of America at Botany 2011 in St. Louis. Here’s the abstract. There’s some talk of the poster itself perhaps being made available online in due course. Fingers crossed.
Phylogeny of American Chenopodium species with focus on origins of the domesticated taxa.
The edible seeds of quinoa (Chenopodium quinoa, Amaranthaceae) have gained popularity worldwide, based on nutritional qualities and ease of growing. Most people do not know quinoa is one of four cultigens of Chenopodium domesticated in the Americas: C. quinoa and C. pallidicaule from South America, C. berlandieri ssp. nuttalliae from Mesoamerica, and the extinct C. berlandieri ssp. jonesianum recovered from archaeological sites throughout eastern North America. Despite nearly 100 years of debate researchers still do not agree on the relationship among these domesticates. Conflicting hypotheses have been proposed asserting whether cultigens were domesticated independently or represent introductions into neighboring regions. Alternative hypotheses suggest two, three, or four independent domestications of Chenopodium in the Americas, and proposed several putative wild progenitors of the cultigens. To investigate the relationships among cultigens of Chenopodium and assess potential wild progenitors, a phylogenetic framework of the genus emphasizing New World species is required. Phylogenetic analyses of DNA sequences of non-coding loci, both nuclear (SOS1 intron 17, COS at103, ITS) and plastid (trnQ-rps16, trnL-trnT, ndhJ-trnF-trnL, psbD-trnT, and psbM-ycf6), were conducted using parsimony, maximum likelihood, and Bayesian analyses. Taxon sampling includes 19 Chenopodium species from North and South America, with focus on the extant cultigens and subspecific taxa within C. berlandieri.
Findings include the following: Chenopodium pallidicaule is genetically distinct from other extant cultigens.
Sampled cultivars of the Mesoamerican cultigen, C. berlandieri ssp. nuttalliae, unite in a single subclade, nested within, but distinct from wild C. berlandieri.
Chenopodium quinoa is nested within the C. berlandieri complex, but not within the C. berlandieri ssp. nuttalliae clade. Interestingly, the southern-most range of wild C. berlandieri is southern Mexico, whereas quinoa is cultivated in Eduador, Peru, and Bolivia. These findings are consistent with independent domestications of the extant cultigens. Using nucleotide markers unique to C. berlandieri ssp. nuttalliae, ancient-DNA analyses will be conducted to determine the relationship of the extinct cultigen, C. berlandieri ssp. jonesianum.
First cassava, now maize. Joya de Cerén certainly deserves its reputation as the Mayan Pompeii. Think they’ll get ancient DNA out of it?
And if that maize link doesn’t work for you, and it didn’t for me, try one of these.