- Viewpoint: COVID-19 and seed security response now and beyond. Think before you spread seeds around.
- Integrated crop-livestock system with system fertilization approach improves food production and resource-use efficiency in agricultural lands. Integrating livestock in soybean production is good for the amount of energy produced per unit of nutrient applied, if that’s what floats your boat.
- Holistic agricultural diversity index as a measure of agricultural diversity: A cross-sectional study of smallholder farmers in Lilongwe district of Malawi. An interesting way of measuring overall farm diversity. But is there a link with dietary diversity?
- Dietary diversity scores, nutrient intakes and biomarkers vitamin B12, folate and Hb in rural youth from the Pune Maternal Nutrition Study. Dietary diversity is linked to better micronutrient status. But is there a link with genetic diversity?
- Evaluating surrogates of genetic diversity for conservation planning. There’s nothing quite as good as neutral markers, alas.
- Phenotypic diversity assessment within a major ex situ collection of wild endemic coffees in Madagascar. Never mind the species or genetic diversity, look at the trait variability.
- Understanding cassava varietal preferences through pairwise ranking of gari‐eba and fufu prepared by local farmer–processors. Landraces are sometimes better than improved varieties.
- Do the importations of crop products affect the genetic diversity from landraces? A study case in garlic (Allium sativum L.). Apparently not, surprisingly enough.
- Overcoming barriers to the registration of new varieties. DUS needs genomics. But what about registering landraces? Do we need a completely separate system for that?
- Legal geographies of kava, kastom and indigenous knowledge: Next steps under the Nagoya Protocol. One approach implementing Nagoya at the community level. But is it scalable?
- New evidence on the earliest domesticated animals and possible small-scale husbandry in Atlantic NW Europe. There was a long period of contact between local hunter-gatherers and incoming farmers, resulting in a transitional farmer-herder stage.
Brainfood: WCR, Parasites, Wild tomato, Wild olive, MAGIC, ART cooking, Payments for conservation, ICARDA barley, Canary barley, Enset, Mexican relicts, Data management, Bumblebee map
- Resistance and Tolerance to Root Herbivory in Maize Were Mediated by Domestication, Spread, and Breeding. Domestication and spread decreased maize resistance to Western corn rootworm, but breeding increased it.
- Does genetic diversity protect host populations from parasites? A meta‐analysis across natural and agricultural systems. Yes, but it depends. Western corn rootworm unavailable for comment.
- Genome of Solanum pimpinellifolium provides insights into structural variants during tomato breeding. Lots of variants in regulatory genes for agronomic traits, compared to domesticated lines.
- Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.). There was a domestication bottleneck back in the day, but that was almost wiped out by later repeated introgression from the wild relative as the crop spread. So quite different from the above maize and tomato cases?
- Multi-parent populations in crops: a toolbox integrating genomics and genetic mapping with breeding. Not just good for QTL mapping any more, but you need a whole package of stuff for them to be useful to breeding programmes.
- Current uses of Andean Roots and Tuber Crops in South American gourmet restaurants. None of the chefs interviewed knew of mauka, but it’s not their fault.
- Payments for agrobiodiversity conservation services: An overview of Latin American experiences, lessons learned and upscaling challenges. Conserving in situ 100 varieties on 5 hectares each would cost US$70,000 p.a. Maybe useful for mauka? But will chefs pay?
- Genetic and agro-morphological diversity in global barley (Hordeum vulgare L.) collection at ICARDA. Under heat stress, though, which is the important bit left out of the title. Unclear if any of the material was from the Canaries (see below), but I can find out if anyone’s interested. Come to think of it, I’m kinda interested myself…
- An Evolutionary Approach to the History of Barley (Hordeum vulgare) Cultivation in the Canary Islands. You can apparently infer historical extents of cultivation on different islands in the archipelago, as well as the timing of separation of populations, which is pretty amazing. No word on representation in rock art though (see below).
- Enset (Ensete ventricosum) and the Archaeology of Southwestern Ethiopia. Information comes mainly from megalithic and rock art sites, which is pretty amazing. No word on genetic relationships, at least in this paper. Do you need me to link to previous Brainfoods on enset? No, of course you don’t, you know how to search the archive. You just put your lips together, and
whistleblow (kudos to whoever quotes the reference in the comments first). - Relict Plant Communities at Prehispanic Sites in Oaxaca, Mexico: Historical Implications. Ancient native Mexicans really liked succulents around their settlements. Well, who wouldn’t, when all is said and done?
- To clean or not to clean: Cleaning open‐source data improves extinction risk assessments for threatened plant species. Clean. Always clean. And then clean again.
- Global Patterns and Drivers of Bee Distribution. Hope they cleaned the data or this unusual double-humped diversity pattern could be in trouble, and that would be a pity.
Nibbles: Seed pod, Lost Thanksgiving, Prairie crops, Wild PNG bananas, Seedkeeper Rowen White, Sustainable farming, Legume journal
- Podcast on saving crop diversity every which way you can.
- Because it can be lost.
- Yes, lost, but, with some effort, bison permitting, found again.
- Wild relatives too, of course.
- And maybe then rematriated, even used for a greener agriculture, who knows.
- So that eventually it can make it into things like Legume Perspective, the cool journal of the International Legume Society that was inexplicably unknown to me until just now.
Nibbles: Climate ready, Commoners, Beer, Banana collecting, Roman food, Indian corn
- Demoing new varieties in Mali.
- Old ways of doing things in the New Forest.
- Nice roundup of beer in ancient history.
- Profile of supercool banana guy Gabriel Sachter-Smith.
- Eat like a Roman.
- Eat like a (multiracial) Southerner.
Brainfood: Genebank technology, Genebank research, Apple genomes, Napier genome, Wheat genome, Blue maize, FACE, Pigeonpea diversity, Millet domestication, Ancient dogs, Ancient bovids, Domestication syndrome, Date pollen, Commons, Genetic diversity trifecta
- New technologies to improve the ex situ conservation of plant genetic resources. Genebanks need to catch up with the latest science even just to maintain their seeds.
- Advanced Strategic Research to Promote the Use of Rice Genetic Resources. High-throughput phenotyping and genome sequencing are the latest science that will make the most of those seeds.
- Phased diploid genome assemblies and pan-genomes provide insights into the genetic history of apple domestication. Analysis of genomes of two main wild progenitors plus the crop uncovers genes so far untapped for improvement.
- The elephant grass (Cenchrus purpureus) genome provides insights into anthocyanidin accumulation and fast growth. It’s related to pearl millet, apparently. Which may or may not be a good thing. No word on any genes so far untapped for improvement.
- Triticum population sequencing provides insights into wheat adaptation. Wide adaptation is largely due to introgression from the wild. No word on any genes so far untapped for improvement.
- The Right Tortilla for the Right Occasion: Variation in Consumers’ Willingness to Pay for Blue Maize Tortillas Based on Utilization. Consumers are willing to pay 42% more for blue tortillas, but only when eating out, presumably as part of virtue signalling.
- 30 years of free‐air carbon dioxide enrichment (FACE): What have we learned about future crop productivity and its potential for adaptation? That enrichment wont save us, that’s what.
- Phenotypic Divergence Analysis in Pigeonpea [Cajanus cajan (L.) Millspaugh] Germplasm Accessions. From 81 accessions to 9 promising ones, at least for Malawi.
- A model for the domestication of Panicum miliaceum (common, proso or broomcorn millet) in China. Domestication took 3000 years.
- Origins and genetic legacy of prehistoric dogs. All dogs are descendants of a now extinct wolf population, and their genetics show both interesting parallels with, and divergences from, that of humans.
- Brain Size Does Not Rescue Domestication Syndrome. Not even for humans, I suspect. Kidding apart, this is fascinating. It suggests that, for animals at least, the domestication syndrome is not actually a thing. Or at least has not been properly tested. If there’s interest, I’ll do a full post. Let me know in the comments below.
- Ancient genomes reveal tropical bovid species in the Tibetan Plateau contributed to the prevalence of hunting game until the late Neolithic. The now tropical gaur ranged much further north during the warmer Neolithic, which facilitated the exploration of the Tibetan Plateau.
- Optimization of in vitro germination and cryopreservation conditions for preserving date palm pollen in the USDA National Plant Germplasm System. Always good to have another way of storing germplasm.
- Beyond the material: knowledge aspects in seed commoning. Comparing global with local seed commons reveals importance of managing knowledge, both scientific and traditional.
- Genetics to the rescue: managing forests sustainably in a changing world. To manage forests sustainably, you have to conserve and use their genetic diversity. Interesting that they needed a conference to work that out.
- Genetic mixing for population management: from genetic rescue to provenancing. And using that genetic diversity could mean mixing it up.
- The importance of genomic variation for biodiversity, ecosystems and people. Maintaining ecosystem services means maintaining genetic diversity. Sounds like these authors went to the same conference.