Dr Sandra Knapp of the Botany Department of the Natural History Museum in London was interviewed by the BBC’s Today Programme this morning about the tomato genome, which of course has been all over the news lately. You can hear her 54:20 minutes in, or, if that doesn’t work, here. Particularly cool that she squeezes in a mention of the wild relative that was also sequenced.
Nibbles: GIBF, Identifiers, Farming animals, Geomedicine, Seed saving, Seeds of Success, CWRs, CORA 2012, Sourdough culture bank, Phenology, Wild Coffea, Cassava conference, Condiments, Gulf truffles, Cashew nut, Home gardens, Tea, Bacterial diversity
- GIBF taxonomy is broken. We’re doomed. No, but it can be fixed. Phew.
- Maybe start with a unique identifier for taxonomists? Followed by one for genebank accessions… Yeah. Right.
- Domesticating animals won’t save them. And more on the commodification of wildlife. Is that even a word?
- Geomedicine is here. Can geonutrition be far behind? We’re going to need better maps, though.
- Saving heirlooms, one bright student at a time.
- “Botanists Make Much Use of Time.” If you can get beyond the title, there’s another, quite different, but again quite nice, seed saving story on page 3.
- “Why aren’t these plants the poster children [for plant conservation]?” You tell me.
- Or, instead of doing something about it, as above, we could have a week of Collective Rice Action 2012.
- You can park your sourdough here, sir.
- How Thoreau is helping boffins monitor phenology. But there’s another way too.
- “She drinks coffee. She farms coffee. She studies coffee.” Wild coffee.
- Massive meet on the Rambo Root. Very soon, in Uganda.
- Ketchup is from China? Riiiight. Whatever, who cares, we have the genome!
- And in other news, there are truffles in Qatar. But maybe not for long.
- The weirdness of cashews.
- The normalcy of home gardens as a source of food security — in Indonesia.
- Ok, then, the weirdness of oolong tea.
- Aha, gotcha, the normalcy of office bacterial floras! Eh? No, wait…
Nibbles: Welsh sheep, Indian cows, International centres, NUS in Asia, Purdue workshop, Onions, New Alliance, Community seedbanks, Seed Savers Exchange, Restoration, Shakespeare
- “I think you’re going to need different sheep.” In Wales, that is. (And different grasslands?)
- And new cattle in India, apparently.
- Another bunch of international agricultural research centres get together. Yeah, because the other lot are doing so well.
- I wonder if any of either lot will be going to this FAO symposium on NUS in Asia in a couple of weeks’ time. And no, I don’t know why we didn’t know about this earlier.
- On the whole, though, I think I’d rather be at the Purdue llama workshop.
- Or, at a pinch, this thing on the edible Alliaceae.
- Wait, there’s also a New Alliance to Increase Food Security and Nutrition. Not sure who’s invited to this party, but the “Rome-based agencies” seem to be the ones throwing it. (I guess this comes on the heels of the Chicago Council on Global Affairs’ annual symposium? Where’s a good summary of what happened there? Anyone? Ah, yes, Ian Scoones explains all.)
- One of those agencies wants to hear from you if you have experience of community “gene/seed banks.”
- Unclear if Seed Savers Exchange would qualify, but they have a bunch of peas out for the “community” to have a look at.
- These Indian award-winners would definitely qualify. Which is just as well as it seems the national genebank is up for sale.
- Meanwhile, botanic gardens get together to restore degraded ecosystems.
- The Bard’s plants. Well, some of them.
BGI picking off CG Centres one by one
ICRISAT is the latest CGIAR Centre to get into bed with the Beijing Genomics Institute (BGI), following IRRI and CIAT. One does wonder whether if the Centres had approached BGI as a group rather than singly, in the context of the much-vaunted restructuring of the CG system, they might not have extracted a better deal from the shrewd gene-jockeys of Beijing.
LATER: Or is the real news, as a message we have received hints, that some CG Centres have NOT succumbed to the blandishments of BGI, because of worries over intellectual property issues? But again, if that is indeed a problem, would not a joint approach have been able to drive a harder bargain on IPR as well as cost? I don’t know. I’m just asking.
Brainfood: Lupin restoration, Balkan wheat drought tolerance, Metabarcoding, Wild sheep genetics, Organic vegetables, Diversity protects, Sorghum geneflow, Wild sunflower genetics
- A Molecular and Fitness Evaluation of Commercially Available versus Locally Collected Blue Lupine Lupinus perennis L. Seeds for Use in Ecosystem Restoration Efforts. Commercial seed sources can be dodgy, and that’s a problem.
- Comparison of responses to drought stress of 100 wheat accessions and landraces to identify opportunities for improving wheat drought resistance. 20 Balkan landraces seemed to be more drought tolerant than 80 accessions sourced globally.
- Towards next-generation biodiversity assessment using DNA metabarcoding. You gotta be kidding me, metabarcoding? Will they be applying it to soils? Yep.
- Selection and microevolution of coat pattern are cryptic in a wild population of sheep. You need to look at the genes.
- Will they buy it? The potential for marketing organic vegetables in the food vending sector to strengthen vegetable safety: A choice experiment study in three West African cities. Not enough.
- Plant diversity improves protection against soil-borne pathogens by fostering antagonistic bacterial communities. Chalk another one up to diversity. Did they say soil?
- Local scale patterns of gene flow and genetic diversity in a crop–wild–weedy complex of sorghum (Sorghum bicolor (L.) Moench) under traditional agricultural field conditions in Kenya. Mostly crop-to-wild, which could be a problem if transgenics are ever grown. If.
- Adaptation with gene flow across the landscape in a dune sunflower… is leading to “ecological” speciation.