- Genetic diversity loss in the Anthropocene. Don’t get excited, I don’t think the method translates to cultivated species, but fancy maths says we’ve lost on average 10% of the genetic diversity within species.
- A graphical causal model for resolving species identity effects and biodiversity–ecosystem function correlations. Yeah, but don’t forget that species level diversity is important too. Or rather, diversity of functional traits among species.
- Cereal species mixtures: an ancient practice with potential for climate resilience. A review. Species level diversity in the same farmer’s field is being forgotten, and that’s bad.
- Microbiomes in agroecosystem: Diversity, function and assembly mechanisms. Even soil microbial diversity is important…
- Association analyses of host genetics, root-colonizing microbes, and plant phenotypes under different nitrogen conditions in maize. …but the effects of soil microbial diversity can get quite complicated, and interact with the genetic diversity of crop plants. Which we may or may not have lost an average 10% of.
- Direct and indirect effects of management and landscape on biological pest control and crop pest infestation in apple orchards. Yeah, but species diversity can be bad too.
Brainfood: Coconut in vitro, Clean cryo, Chickpea & lentil collections, Genebank data history, Eurisco update, Mining genebank data, TIK, Sampling strategy, Drones, GIS, Mexican CWR, Post-2020 biodiversity framework
- Thiamine improves in vitro propagation of sweetpotato [Ipomoea batatas (L.) Lam.] – confirmed with a wide range of genotypes. Getting there, keep tweaking…
- Minimizing the deleterious effects of endophytes in plant shoot tip cryopreservation. Something else to tweak.
- Ex Situ Conservation of Plant Genetic Resources: An Overview of Chickpea (Cicer arietinum L.) and Lentil (Lens culinaris Medik.) Worldwide Collections. Thankfully not much in vitro and cryo involved. The main tweak necessary is to share more characterization data with breeders.
- Data, Duplication, and Decentralisation: Gene Bank Management in the 1980s and 1990s. Ah, but do calls for more data also reflect attempts to cut costs and build political bridges? And would that be so bad?
- EURISCO update 2023: the European Search Catalogue for Plant Genetic Resources, a pillar for documentation of genebank material. Arguably, Eurisco tries to do all of the above, and pretty well.
- Bioinformatic Extraction of Functional Genetic Diversity from Heterogeneous Germplasm Collections for Crop Improvement. You need fancy maths to make sense of all that data. And use it.
- Research Status and Trends of Agrobiodiversity and Traditional Knowledge Based on Bibliometric Analysis (1992–Mid-2022). Not much traditional knowledge in those databases, though, eh? That would be one hell of a tweak.
- Species-tailored sampling guidelines remain an efficient method to conserve genetic diversity ex situ: A study on threatened oaks. Meanwhile, some people are still trying to figure out the best way to tweak sampling strategies to add diversity to genebanks. Spoiler alert: you need data on individual species.
- Collecting critically endangered cliff plants using a drone-based sampling manipulator. You also need drones.
- Application of Geographical Information System for PGR Management. One thing you can do with all that data is map stuff. So at least the drones know where to go.
- Incorporating evolutionary and threat processes into crop wild relatives conservation. The only thing that’s missing from this is traditional knowledge. And maybe drones.
- Conserving species’ evolutionary potential and history: opportunities under the new post-2020 global biodiversity framework. All these data will allow us to measure how well we’re doing. And whether we can ask for cryotanks, drones, and better databases.
Brainfood: Indigenous crops, Indian vegetables, Local breeds, Wheat identity, Date names, Food security & heritage, Peruvian cuisine, Food sovereignty, Palestinian seeds, Tea culture, Sacred groves, Food system transformation, Diverse landscapes
- Renaming Indigenous crops and addressing colonial bias in scientific language. Orphan is out, Indigenous is in.
- Vegetable Genetic Resources to Mitigate Nutritional Insecurity in India. How many of these Indian vegetables are Indigenous as opposed to indigenous though?
- Farmers using local livestock biodiversity share more than animal genetic resources: Indications from a workshop with farmers who use local breeds. Farmers using local breeds don’t share colonial bias, I suspect. Or do they? Has anyone checked?
- Because error has a price: A systematic review of the applications of DNA fingerprinting for crop varietal identification. Nobody’s perfect, even the colonially unbiased.
- What lies behind a fruit crop variety name? A case study of the barnī date palm from al-‘Ulā oasis, Saudi Arabia. Local variety names are complicated, no wonder mistakes happen.
- Food security and the cultural heritage missing link. Want to preserve cultural heritage AND boost productivity? Then support (1) preservation of genetic resources, (2) value addition, (3) traditional food processing, (4) preference matching, and (5) agritourism. What, no fighting colonial bias?
- Analysis of Innovation in Peru’s Gastronomic Industry. All of the above?
- Food sovereignty in sub-Saharan Africa: Reality, relevance, and practicality. All of the above are well and good, but not enough. You also need modern varieties. Just get their names right, eh?
- Baladi Seeds in the oPt: Populations as Objects of Preservation and Units of Analysis. Whatever you do, don’t reduce cultural heritage to data.
- Reinventing a Tradition: East Asian Tea Cultures in the Contemporary World. No danger of reducing tea to data, judging by this collection of papers.
- Factors driving the tree species richness in sacred groves in Indian subcontinent: a review. Not religion, apparently, according to the data. Go figure.
- The role of traditional knowledge and food biodiversity to transform modern food systems. There is plenty of evidence out there that bringing greater biodiversity into food systems results in multiple socio-cultural benefits. As this Brainfood, as well as the case studies in this paper, tries to show.
- Complex agricultural landscapes host more biodiversity than simple ones: A global meta-analysis. Had enough?
Brainfood: Opuntia breeding, Teosinte genes, Sugarcane breeding, Proso diversity, Watermelon diversity, Wheat pre-breeding, Sorghum wild relatives, Grasspea evaluation, Banana domestication, Pea pan-genome, Bambara diversity
- Needs and strategies for breeding and sustainable use of genetic resources in Opuntia. Surely there are molecular markers for spinelessness by now?
- Teosinte confers specific alleles and yield potential to maize improvement. There are 71 QTLs associated with 24 differential traits between maize and teosinte.
- A short review on sugarcane: its domestication, molecular manipulations and future perspectives. Forget sugar or fuel, the future is vaccine production.
- SNP discovery in proso millet (Panicum miliaceum L.) using low-pass genome sequencing. Ok, but why are the South Asian accessions so different from everything else?
- Meta-analysis of qualitative and quantitative trait variation in sweet watermelon and citron watermelon genetic resources. Rob citron to pay sweet watermelon.
- Genomics-informed prebreeding unlocks the diversity in genebanks for wheat improvement. How I learned to stop worrying and love non-adapted germplasm.
- Wild Sorghum as a Promising Resource for Crop Improvement. Oooh, I like the idea of de novo domestication of Australian wild sorghum species.
- Disentangling the Genetic Diversity of Grass Pea Germplasm Grown under Lowland and Highland Conditions. Always good to have multi-locational trial data, even when n=2.
- Hybridization, missing wild ancestors and the domestication of cultivated diploid bananas. Let the search for the 3 unknown wild ancestors begin!
- Improved pea reference genome and pan-genome highlight genomic features and evolutionary characteristics. If only Mendel had worked on wild peas too.
- Genetic diversity and population structure analyses of South African Bambara groundnut (Vigna subterranea [L.] Verdc) collections using SNP markers. Two heterotic groups to play around with.
Brainfood: Diversity & stability, Diversity & profitability, Rotations, Food environments, Food system transitions, Deforestation & ag, Great Lakes priorities, Translational research, Field size, Genetic erosion
- Consistent stabilizing effects of plant diversity across spatial scales and climatic gradients. More species-diverse communities are more stable. Ok, what about agricultural systems though?
- Financial profitability of diversified farming systems: A global meta-analysis. Total costs, gross income and profits were higher in diversified systems, and benefit-cost ratio similar to simplified systems. No word on stability, alas.
- Global systematic review with meta-analysis reveals yield advantage of legume-based rotations and its drivers. Integrating a legume into your low-diversity/low-input cereal system can boost main crop yields by 20%. I wonder if this meta-analysis was included in the above meta-analysis. Again, no word on stability though.
- The influence of food environments on dietary behaviour and nutrition in Southeast Asia: A systematic scoping review. It’s the affordability, stupid. Should have gone for more diversified farming I guess :)
- Global food systems transitions have enabled affordable diets but had less favourable outcomes for nutrition, environmental health, inclusion and equity. Well according to this, industrialised farming (ie simplification) has led to more affordable diets. But we know from the above that diversification can be profitable. So it was the wrong kind of simplification? Can we diversify now and maintain affordability while also improving nutrition, environmental health, inclusion and equity? Wouldn’t that be something.
- Disentangling the numbers behind agriculture-driven tropical deforestation. Ending deforestation is not enough. The resulting agriculture must be diversified in the right way too, I guess.
- Strategizing research and development investments in climate change adaptation for root, tuber and banana crops in the African Great Lakes Region: A spatial prioritisation and targeting framework. Diversifying with drought-tolerant bananas and heat-tolerant potatoes is all well and good, but you also have to know where exactly to diversify, and here’s how.
- Translational research in agriculture. Can we do it better? Difficulty developing drought-tolerant bananas and heat-tolerant potatoes? Get more diverse peer-reviewers.
- Increasing crop field size does not consistently exacerbate insect pest problems. When you diversify, don’t worry too much about making fields bigger.
- Genetic diversity loss in the Anthropocene. You can predict change in genetic diversity from change in range size, and the average is about a 10% loss already. Ok, what about agricultural systems though? Wait, isn’t this where we came in? My brain hurts…