- Developing country demand for crop germplasm conserved by the U.S. National Plant Germplasm System. 5 years, 10 crops, 100,000 samples.
- cacGMS: An Algorithm Cluster Germplasm based on Categorical Genetic Traits. Build a better cluster algorithm for categorical descriptors and the world will beat a path to your genebank. If it isn’t already.
- Deep learning: as the new frontier in high-throughput plant phenotyping. A really fancy way of scoring those descriptors.
- Selection of duplicates of flax accessions – an important task in the management of collection of genetic resources of Linum usitatissimum L. But you can do a lot with passport data.
- Mining for allelic gold: finding genetic variation in photosynthetic traits in crops and wild relatives. Let the gene editing begin!
- Expanding the genetic variation of Brassica juncea by introgression of the Brassica rapa genome. AABB gets a shot of AA.
- Adaptive potential of Coffea canephora from Uganda in response to climate change. Some populations are going to do better than others under climate change. Ah, but are they the best populations for other traits?
- Pre-domestication bottlenecks of the cultivated seaweed Gracilaria chilensis. Founder effect and over-exploitation mean that more diversity from New Zealand might be needed.
- Genomic consequences of domestication of the Siamese fighting fish. You don’t need huge genetic diversity to get huge phenotypic diversity, even with strong selection. But will new diversity be needed eventually? From Siam?
- Food versus wildlife: Will biodiversity hotspots benefit from healthier diets? Some hotspots will actually do worse if people eat better, so we will have to look at better agriculture too. Including seaweed, for all I know.
- Commodity crops in biodiversity-rich production landscapes: Friends or foes? The example of cotton in the Mid Zambezi Valley, Zimbabwe. Possibly an example of the above. Cotton was better for wildlife than what came after prices dropped.
Nibbles: Future Seeds, Irish Seed Savers, ICRAF genebank, Cherry blossoms, Coffee futures, Eat This Newsletter
- More on how Future Seeds fits into the global system of genebanks. And more still.
- You can immerse yourself in the Irish Seed Savers genebank.
- Do you want chips with your tree genebank?
- There’s a sort of cherry blossom genebank in the Smithsonian Gardens.
- The Economist fails to mention genebanks in its piece on how to save coffee from climate change. Here’s an EU project that’s using coffee diversity for adaptation.
- Jeremy’s latest newsletter looks at everything from the denazification of cattle to yams. But not genebanks. Subscribe anyway!
Nibbles: Zimbabwe breeder, Indian genebank, Zambian genebank, Chinese genebank, Pakistan & Uzbekistan, Manchester planting
- Sorghum and millet breeder honoured in Zimbabwe. Always good to see.
- Germplasm evaluation efforts of Indian national genebank make it into the mainstream financial press. Also very good to see.
- Zambian national genebank does some much-needed safety duplication. More good news.
- Possibly good news, hard to say: Russian news agency on what seems to be a new wild rice genebank in China.
- Always good news to see two countries agree to collaborate on genetic resources.
- Manchester viaduct gets a greenlift. Good to see it, despite no genebanks being involved.
Brainfood: Spatial data, Extinction risk, Improved lentils, Lentil collection, Ohia germination, Shea genomics, Wild olive, Cacao climate refugia, Cacao sacred groves, Italian winter squash, Nigerian yams, Bambara groundnut diversity
- CropHarvest: A global dataset for crop-type classification. 90,000 datapoints all over the world, nicely labelled with what’s going on there agriculturally speaking. Let the AI rip.
- Using publicly available data to conduct rapid assessments of extinction risk. Pretty much useless, but at least now we know why. Should have used AI.
- Plot-level impacts of improved lentil varieties in Bangladesh. About 15% higher yields and gross margins, resulting in lots of savings on imports.
- Agro-Morphological Characterization of Lentil Germplasm of Indian National Genebank and Development of a Core Set for Efficient Utilization in Lentil Improvement Programs. And a core subset to boot. Unclear if any were used to breed the above.
- Variation in Germination Traits Inform Conservation Planning of Hawaiʻi’s Foundational ʻŌhiʻa Trees. Germination was lower from some populations than from others, but not because of environmental factors.
- Genomic Resources to Guide Improvement of the Shea Tree. Ok, great, but now what exactly? And no word on germination…
- Current Status of Biodiversity Assessment and Conservation of Wild Olive (Olea europaea L. subsp. europaea var. sylvestris). When can we expect something similar for shea tree?
- Extreme climate refugia: a case study of wild relatives of cacao (Theobroma cacao) in Colombia. The forest areas where wild cacao has survived the longest, and is particularly diverse, will be cut in half in 50 years. I wonder what the figures are for wild olive.
- Soil biomarkers of cacao tree cultivation in the sacred cacao groves of the northern Maya lowlands. Maybe re-introduce it? More here.
- How to save a landrace from extinction: the example of a winter squash landrace (Cucurbita maxima Duchesne) in Northern Italy (Lungavilla-Pavia). It’s great to have ‘Berrettina di Lungavilla’ back, but 7 years for one landrace? No sacred groves involved. Shea harvesters unavailable for comment.
- Collection, characterizaton, product quality evaluation, and conservation of genetic resources of yam (Dioscorea spp.) cultivars from Ekiti State, Nigeria. At least it’s more than one landrace.
- Genetic Diversity and Environmental Influence on Growth and Yield Parameters of Bambara Groundnut. 95 landraces, no less. All safe from extinction. Right?
Brainfood: Neodomestication, Millet diets, OFSP, Fruits, Okra core, Floating gardens, Quinoa evaluation, Bean cooking, Neolithic, Lychee genome, Climate change, European maize double
- Scaling up neodomestication for climate-ready crops. Ok, but when is enough enough?
- Can Feeding a Millet-Based Diet Improve the Growth of Children? — A Systematic Review and Meta-Analysis. Yes. So maybe make the most of the crops we already have?
- Does vitamin A rich orange-fleshed sweetpotato adoption improve household level diet diversity? Evidence from Ghana and Nigeria. Sometimes. So maybe make the most of the crops we already have?
- Global interdependence for fruit genetic resources: status and challenges in India. So many crops out there.
- DATASET: The World Vegetable Center okra (Abelmoschus esculentus) core collection as a source for flooding stress tolerance traits for breeding. This is one way of making the most of the crops we already have.
- The floating garden agricultural system of the Inle lake (Myanmar) as an example of equilibrium between food production and biodiversity maintenance. This is another way of making the most of the crops we already have.
- Phenotyping a diversity panel of quinoa using UAV-retrieved leaf area index, SPAD-based chlorophyll and a random forest approach. Oh look, here’s another, and all you need is a drone and fancy maths.
- The Phaseolus vulgaris L. Yellow Bean Collection: genetic diversity and characterization for cooking time. For this one you don’t even need a drone.
- Prehistoric Farming Settlements in Western Anatolia. What, only 5 crops?
- Two divergent haplotypes from a highly heterozygous lychee genome suggest independent domestication events for early and late-maturing cultivars. Ancient farmers knew what they were doing after all, eh?
- Expected global suitability of coffee, cashew and avocado due to climate change. Millennials could be in trouble if new crops don’t come along.
- Traditional Foods From Maize (Zea mays L.) in Europe. Maybe European millennials could eat more maize.
- Growing maize landraces in industrialized countries: from the search for seeds to the emergence of new practices and values. Nah, let’s domesticate something else instead.