- Sir Nathaniel Bacon’s painting records the arrival of American crops in early modern England. And the cookmaid gets equal billing.
- North America’s bison survived near-extinction, but how much of its genetic diversity is left? Past and present DNA is helping reconstruct what was lost, with implications for how what remains is conserved and managed.
- China’s wild rice collection in Hainan now holds more than 15,000 samples. A genetic treasure trove, but its value ultimately depends on what breeders can make of it. Much like what’s left of bison diversity.
- Mycorrhizal fungi form vast underground networks that support plant life and store carbon. A new global map begins to show their extent, and just how much of this biodiversity remains overlooked.
- Africa’s herbaria hold centuries of botanical history, much of it still effectively invisible. Specimens can reveal shifting plant distributions and overlooked species. First, though, someone has to do the painstaking work of getting the data online.
- Africa has done painstaking work on seed laws, but getting good seed to farmers remains hard in practice. The gap between policy and delivery is stark, and commercial companies need to work alongside farmer-managed seed systems, not pretend they don’t exist.
Good news from Beltsville?
After the recent worrying announcement about the USDA closing the Beltsville Agricultural Research Center, there may now be some good news. US Secretary of Agriculture Brooke Rollins has just announced a $180 million Seed Sovereignty Initiative to genotype collections of “major crops” in the National Plant Germplasm System, which holds more than 600,000 accessions of over 16,000 species. The two-year programme aims to reveal useful traits, identify gaps in the collections, and accelerate the development of new varieties. That’s a substantial investment in resources that are all too often taken for granted.
But the language is worth a closer look. This is framed as a matter of seed sovereignty and national security: the United States must not depend on “foreign adversaries” for its agricultural production, while foreign competitors are busy sequencing genetic resources. The emphasis is on turning America’s crop diversity collections, which are in the Multilateral System of the Plant Treaty, into a strategic national asset, and giving American farmers a competitive advantage.
None of that makes the investment unwelcome. Better genetic characterization could benefit researchers and breeders well beyond the United States, provided the resulting information is accessible. And understanding what genebanks hold, and what remains missing, is precisely the sort of work that should have been a priority all along.
Still, there is a difference between recognizing the strategic importance of crop diversity and treating it as a weapon in geopolitical competition. Will this initiative strengthen the shared knowledge base on which global crop improvement depends, or will national advantage determine what gets studied, shared and used? The $180 million investment is good news. The rhetoric, and the priorities it may signal, deserve rather more scrutiny.
The chocolate formerly known as lost
The Quest to Save the World’s Most Coveted Chocolate is an engaging story in Smithsonian Magazine about Ecuador’s ancient, iconic Nacional cacao. It was published three years ago, but I only just came across it. It rang a bell, so I went back through the archive. And there was lots more there than I suspected. Again in celebration of our twentieth anniversary, let’s go through it.
It all started in 2009, when Jeremy first described how witches’ broom had devastated Nacional cultivation in the early 1900s, how breeders responded, and how farmers eventually widely adopted the more productive and resistant, but much less tasty, new variety known as CCN51. Nacional basically disappeared.
But not totally. In 2011, we Nibbled the rediscovery of Nacional populations in northern Peru by a USDA team, as reported in the N.Y. Times. A glimmer of hope, perhaps?
In 2015, Jeremy returned to the story. We learned that more than half of Ecuador’s cacao trees were then CCN51, which of course made the industry again vulnerable to the next disease. And, even worse, that the chocolate they produced tasted like “rusty nails.”
But now — thankfully — comes a much happier chapter, nicely described in the Smithsonian piece.
Encouraged by the discovery of Nacional in Peru, a motley crew of conservationists, chocolate makers and agricultural scientists went looking for it in Ecuador. In 2013, they found a grove of century-old trees in a coastal valley called Piedra de Plata. DNA showed that nine of 47 trees they sampled were genetically pure Nacional. They established them in a field genebank in 2018, and started producing planting material for interested local farmers.
More than 30 families are now working … to reforest their lands using seedlings from the nearly extinct tree. The rebirth of this once-lost treasure isn’t just a miracle for the chocolate-loving world — it’s also a milestone in reviving the rich heritage of Ecuador’s coastal forests and farming. And it may even offer hope for saving other endangered trees worldwide.
The plan was that within three years the nursery would be producing 5,000 Nacional seedlings annually. That would be about now. Alas, I was not able to find an update, but I do hope they’re on track.
The moral? Conservation pays — especially when what you’re conserving makes chocolate that doesn’t taste like rusty nails.
Nibbles: African food systems, Uganda cassava, Uganda pastoralists, Butternut conservation, Seed transfer zones webinar, Frozen Zoo, India fish genebank
- Swapping maize for indigenous crops won’t fix African food systems designed around markets and policies that still favour a narrow range of crops.
- Cassava is both a food security fallback and a commercial crop in Uganda, but disease, climate change and declining diversity make its conservation an increasingly urgent form of insurance. But what about the markets and policies?
- When livestock and crops fail, Ugandan pastoralists draw on wild plants for food, underlining how much food-system resilience still sits outside the formal agricultural system, with its markets and policies.
- The Morton Arboretum is using living collections and genetic research to help the threatened butternut tree cope with changing conditions.
- Webinar discusses global approaches to seed provenancing and transfer zones, useful for anyone who wants to move native plants without moving the wrong genes. Butternut very interested.
- San Diego Zoo Wildlife Alliance’s Frozen Zoo preserves genetic material of plant and animal species that may disappear, from DNA to cells to organisms. Butternut volunteers.
- New Indian facility combines ex situ fish conservation with community aquaculture. Good model for much of the above?
Brainfood: Tree conservation from assisted migration to cryo
- The potential effect of megafaunal extinctions on modern conservation of horse chestnut Aesculus hippocastanum. The extinction of large seed-dispersing mammals (i.e. elephants) may explain why horse chestnut failed to recolonise Europe after the last ice age, pointing to assisted migration as a conservation option.
- Mapping melliferous tree species in Kenya via one-class classification with hyperspectral unsupervised domain adaptation. Hyperspectral remote imagery and fancy maths can accurately identify and locate Kenya’s honey trees, potentially supporting both conservation and beekeeping. Brave new world. Elephants not involved.
- Everyday agroecologies in the Mixteca Alta, Mexico: gendered knowledge and practices in homegarden agroecosystem management. Women’s knowledge helps sustain homegardens as reservoirs of agrobiodiversity and climate-adaptation spaces, embedding many interesting wild and cultivated trees, along with much else, in wider systems of knowledge and resource management.
- Integrative DNA barcoding and multimethod species delimitation reveal marker performance in the genus Ficus L. (Moraceae). Takes on the old taxonomic problem of where one fig species ends and another begins. Ficus is an especially resonant group for today’s tree-themed roundup: taxonomically challenging, ecologically consequential, economically and culturally important, tied to famously specialised pollination relationships. “Integrative” means the usefulness of a DNA marker must be tested against other evidence and against the particular boundaries one is trying to recognise.
- Chloroplast phylogeographic analysis guides the source tracing and conservation strategies of the endangered Magnolia kwangsiensis Moving down one biodiversity level, mapping maternal genetic structure helps identify appropriate seed sources for conservation and restoration, rather than treating all populations as genetically equivalent. Next comes feeding the seeds to passing elephants.
- Development of a simple and easily interpretable cultivar identification system using 18 insertion/deletion (InDel) markers in Japanese pummelo (Citrus maxima). Really simple markers can identify Japanese pummelo cultivars, and even reveal clues about their parentage.
- К 100-летию отдела генетических ресурсов плодовых культур ВИР. (On the 100th Anniversary of the Fruit Crop Genetic Resources Department of VIR). A century-long institutional case study in tree (ok, and shrub) conservation at scale: some 19,000 fruit, nut and berry accessions now held in field genebanks across ten Russian field stations, each sited in the climate zone that suits what it conserves.
- Cryopreservation strategies for trees: Leveraging organogenesis and somatic embryogenesis for effective conservation. Combining ultra-low-temperature storage with making shoots or roots from an explant tissue and making embryo-like structures from non-reproductive cells offers ways to emulate seeds when the real things cannot be easily stored in the usual way, field genebanks cannot be guaranteed to last 100 years, and there are no elephants around.