- Can bison play a role in conserving habitat for endangered sandhills species in Canada? Maybe, hence the recommendation to re-introduce them. Incidentally, there are a few crop wild relatives on the list of threatened plants of Canada.
- Genetic improvement of farmed tilapias: Genetic parameters for body weight at harvest in Nile tilapia (Oreochromis niloticus) during five generations of testing in multiple environments. The 10-year “Genetic Improvement of Farmed Tilapias” (GIFT) project was not a complete waste of time. The GIFT population will respond well to selection for increased body mass, and you dont have to do the evaluation in lots of different environments.
- Mycorrhizal colonization of major banana genotypes in six East African environments. Different banana genotypes had different levels of infection, but environment also plays an important role. Important because arbuscular mycorrhizal fungi may increase production.
- On the use of depth camera for 3D phenotyping of entire plants. An example of this.
- Genetic and phenotypic diversity in a germplasm working collection of cultivated tropical yams (Dioscorea spp.). Should be a good starting point for improvement programmes. Kind of like the GIFT population, then, eh? But starting point? Haven’t people been breeding yams for a while?
- Cytogeography of the Humifusa clade of Opuntia s.s. Mill. 1754 (Cactaceae, Opuntioideae, Opuntieae): correlations with pleistocene refugia and morphological traits in a polyploid complex. The southeastern and southwestern U.S. represent glacial refugia for diploid members of the clade, and a whole bunch of polyploids resulted when the taxa spread out again after glacial episodes. How many of these are eaten is what I’d like to know, and whether ploidy affects that. I suppose climate change will lead to further complications?
- The impact of agricultural intensification and land-use change on the European arable flora. Is significant. Not least because some crop wild relatives are involved, although that’s not really discussed here.
Nibbles: Feeding the world edition
- BBC says we can feed the world through technology. And why not. The Times of India, meanwhile, didn’t get the memo.
- Bill Gates at the IFAD Governing Council will probably say the same thing today. And put his money where his mouth is.
- CIMMYT Director General said the same recently at an Economist conference. Funny how genebanks are rarely among the saviour technologies being touted.
- It’s all about the scaling up, isn’t it?
- Tell that to the Lake Chad fisherfolk who are now turning to farming.
- And, in another universe, sushi seeks protection.
- Buffel vs Rhodes in the Arabian peninsula.
Getting to the root of the Ceora family tree
Those of you who remember our little discussion here recently of grasspea breeding, and in particular the importance (or otherwise) of breeding for low values of the neurotoxin β-N-oxalyl-L-α,β-diaminopropionic acid (β-ODAP) in its seeds, will not be surprised to learn that a press release a few days ago announcing a new(ish) promising low-ODAP variety called Ceora sent me scurrying around in Genebank Database Hell.
Grass pea is a hardy annual legume with a growth habit similar to field pea, characterised by resistance to both drought and waterlogging. Its low cost, low input nature makes it a prime feed crop.
It has been restricted in use, however, due to the presence of neurotoxin ODAP, which causes paralysis of the lower limbs (lathyrism).
This was overcome by the breeding of cultivar Ceora (Lathyrus sativus) by Dr Colin Hanbury, Prof Kadambot Siddique and Dr Ashutosh Sarker of the Centre for Legumes in Mediterranean Agriculture (CLIMA).
With an ODAP level of 0.04 to 0.09 percent, Ceora virtually eliminates the toxin’s effects, making it safe for animal consumption.
Dr Gusmao has delved deeper into the plant’s benefits.
Those benefits are a suite of adaptations to cope with, and indeed also avoid, water deficits. Promising indeed. But how was this miracle plant concocted?
Ok, so googling pretty quickly revealed that Ceora, which incidentally “is the first grass pea (Lathyrus sativus) cultivar to be bred and released in Australia” …
…was derived from a cross made in 1994 at Northam, Western Australia (WA), using female parent K33 (originating from Pakistan) x male parent 8604 (originating from Bangladesh).
That’s from its official registration note. So all we now have to do is trace K33 and 8604. And that’s where I hit a wall. Because apart from finding that 8604 was also subsequently called ATC 80723 (see page 425 here), I could make no further headway. ((The ATC apparently refers to its ATFCC, or Australian Temperate Field Crops Collection, record, which indicates that it came from Bangladesh via the Western Australian Department of Agriculture, circa 1994.)) Sure, 8604 might be this accession in GRIN. But then again it might not be. And of a K33 (in its various permutations) from Pakistan I could find no mention in any database. There’s a grasspea labelled K33 cv Zubryak from Russia in VIR’s database, but that’s coincidence, surely.
So I was reluctantly forced, and not for the first time, to enlist the help of a Virgil, in this case Dirk Enneking, who has commented here frequently on grasspea and other pulse breeding issues. To cut a long story short, he used his global network of grasspea contacts to discover (or re-discover, as he also found some of this stuff buried in his old notes), that 8604 is a breeding line developed by crossing the Indian line Pusa-24 (as male) with the Bangladeshi landrace “Jamalpur local” (female). Both P-24 (as it is also known) and Jamalpur local have a history of use in grasspea improvement. The former in particular is known for its low ODAP content. As for, K33 its origin seems to lie with Pakistani researcher Hafeez I.T. Khawajas, but little is know beyond that.
Anyway, all this is of any conceivable interest to anyone only if they can get hold of the germplasm. ((Or perhaps if they doubt the value of multilateralism.)) Ceora is of course commercially available, although a reference sample is also stored in the USDA system. So too is P-24, although it is presumably also in the Indian genebank at NBPGR (and perhaps ICARDA, though I couldn’t find it on Genesys). Hopefully all this stuff is at Horsham, but I cannot be sure because they, like NBPGR, are not online. For now.
P.S. And here’s a final thought. This took a couple of weeks and endless emails to unravel. The much more complicated Wita 9 pedigree story just a few clicks. Once we get genebank databases sorted out, we’ll have to link them to breeders’ databases. Once.
P.P.S. Now, speaking of grain legume breeding in Australia, did someone mention the Afghan pea accession PS998?
Nibbles: Chinese agriculture, Domesticating trees, Greening economies, Genebanks, Millets
- Modern Chinese agronomist praises ancient Chinese agriculture, possibly gets in trouble.
- Domesticating trees is still the next big thing.
- Transform agriculture for a greener economy, says SciDev.net.
- VoA on genebanks, including Svalbard.
- Gerbil enthusiasts tackle millets. Yes, gerbils.
Luigi speaks! A way out of genebank database hell?
There’s nothing like being associated with manifest power to pique the interest of mainstream media. And so it was when The White House, no less, hosted a breakfast on Innovation for Global Development. Announced at the breakfast was a new version of “the Germplasm Resources Information Network-Global (GRIN-Global), a powerful but easy-to-use, Internet-based information management system for the world’s plant genebanks”. Journalists who normally wouldn’t give GBDBH the time of day were suddenly queuing to explain why this was such a good thing. And among the people they queued for was the Global Crop Diversity Trust’s Luigi Guarino. Here’s the BBC World Service’s story. Luigi speaks at 1’21”
GRIN Global on the BBC World Service, Feb 18 2012
Suitably enlightened, forgive my cynicism when I wonder what prompted a web page about the International Crop Information System to suddenly bleep on my horizon-scanning radar. At first blush it looks like it does much the same job as GRIN-Global, but that can’t possibly be correct. It must do something slightly different — powerful, undoubtedly, but by the look of things not easy to use and not internet based — which I welcome in the name of diversity and the resilience that promotes.