Evaluating St John’s wort not as easy as it sounds

USDA researchers at Ames, Iowa are screening 180 accessions of St Johns wort (Hypericum) for biologically active compounds. I hope they’ll take into account phase of the moon in their evaluations:

Research on St. John’s wort (Hypericum perforatum, Hypericaceae) herb, one of the top ten herbal products in retail sales in the United States, has shown seasonal variation and differences due to cultivation location. Levels of hypericin and pseudohypericin, the compounds to which commercial products are usually standardized, were found to vary from 100 ppm to 5000 ppm from winter to summer. This remarkable quantitative difference in compounds could account for some of the differences in commercial products whose raw materials are usually from multiple sources. Additional studies with St. John’s wort found significant variation among wild and cultivated plants sourced from around the world.

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More on future-proofing germplasm collections

A reply to Walck & Dixon from Brian Forde-Lloyd, Nigel Maxted and Luigi Guarino.

ResearchBlogging.orgIn Walck and Dixon’s opinion (Nature 462: 721, 2009) it’s ‘time to future-proof plants in storage’, but how novel and useful is this idea? ((Walck, J., & Dixon, K. (2009). Time to future-proof plants in storage Nature, 462 (7274), 721-721 DOI: 10.1038/462721a)) Few would argue with the principle that we need to maximise the range of genetic diversity conserved ex situ, but some of the issues raised need further consideration.

1. Collecting species at the limits of their ranges could be a good idea — this could be where adaptations most likely to be occurring; for wild wheat populations, genes thought to be adaptive to biotic and abiotic stress have been found to be highly variable in some ecological circumstances (e.g. wild wheat in Israel). But, more generally, population genetic theory suggests that genetic diversity will reduced at range margins, where population sizes will be small.

2. Collecting samples every 10 to 20 years may not be long enough for genetic adaptation to be manifested, particularly in perennial species, but equally may not be frequent enough to prevent severe genetic erosion under rapid climate change of annual species.

3. ‘Conditioning’ seeds at high temperature to allow for the selection of genotypes with temperature tolerance will have a seriously adverse effect on genetic diversity as a whole. Regenerating seeds from small numbers followed by their reintroduction will impose a severe genetic bottleneck. On the positive side, evaluating germplasm for adaptation to abiotic stress has certainly been encouraged for many years now by those scientists, genetic conservationists and plant breeders who continue to value and conserve those wild plant species that are relatives of crops.

4. Mixing seed samples to allow ‘cross-breeding’ and then allowing selection to act upon the genetic variation that results is not dissimilar to plant breeding. But is it not just as likely that outbreeding depression rather than the desired heterosis will result? There is a growing opinion amongst plant breeders anyway that conventional plant breeding is too slow a process to keep up with climate change. Also, is it feasible to consider ‘breeding’ is manner suggested all wild species before they are reintroduced to the wild.

5. ‘Conditioning’ and mixing seed sample then replanting them in the wild is likely to result in genetic pollution and potential diluting of local ecotypic adaptation. This has already been shown to occur in species with wild and cultivated components. The niche that any plant grows within is defined by a complex range of biotic and abiotic interactions and not all will be impacted by a changing climate.

6. But here’s the real conundrum, if seed banking (ex situ conservation) is currently inadequate, why not simply rely upon in situ conservation of wild plant species in genetic reserves? It would seem that the arguments that climate change will preclude such an approach in the near future applies equally to the suggestions made in this article.

In the final scheme of things, complementary approaches to the conservation of plant diversity, both ex situ and in situ, are important for that diversity to be used to its fullest, and not just for reintroduction alone. This needs strengthened support in the face of climate change, the scientific case for which has been argued for at least the last 20 years.

A pioneering biologist almost discusses the keys to crop conservation

Because right now, still, the planet is blind. In other words I can step into the genebank of Brazil and understand it. But 99.9999 percent of the planet cannot. And so whether you’re eating in a restaurant in New York City, whether you’re a Nigerian farmer, or whether you’re a school kid walking to school in Arizona — it doesn’t matter. You are blind; you are illiterate. And this gives you the chance to be able to read. That will change our relationship to agrobiodiversity enormously. And I feel that’s the only chance for [combating] apathy. If people can “read” agrobiodiversity, they will then, for their own reasons, find it much more valuable to be interested in it, and as a consequence, [are] much more likely to be willing to save key pieces of it… And the only way that societies will be tolerant of big genebanks is if those big genebanks are offering them something. And if you’re blind to what’s in it, you’ve suddenly cut the list of what it can offer you down very severely…

The world has 1700 different crop genebanks. Every one of those things is someone’s salary, someone’s career, someone’s motivation. And they couldn’t care less about the whole thing. They care about the pieces in their backyard. And so the outcome is that you have 1700 collections which add up to x percent of the whole genepools. Well, if you ask me, I will tell you brutally that 50 percent of those will be dead and worthless in 50 years. But that doesn’t help the guy whose job it is to protect it, to raise money for it. He wants his income now. And the fact that it’s going to die 50 years from now couldn’t matter less…

I had to give a five-minute talk in California a few months ago, and I found myself saying, “Look, the threats are fragmentation, apathy, climate change, and small size.” Those are the threats. And the solutions are endowment, bigger size, and information systems…

Well, the legendary conservationist Daniel Janzen didn’t say these things. Not quite, anyway. But I didn’t change many words, and not by much. He was talking about protected areas, but it is quite amazing how similar are the problems of ex situ conservation of crop diversity. Too bad the two things are so often seen as antithetical.

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