- NBPGR-PDS: A Precision Tool for Plant Germplasm Collecting. Fancy software can manage germplasm collecting info in the field.
- The role of genotypic and climatic variation at the range edge: A case study in winegrapes. Fancy software and analysis can predict how different grape varietals could expand in distribution under climate change.
- ClimMob: Software to support experimental citizen science in agriculture. Fancy software can help plan, manage and analyze large-scale, farmer-led germplasm evaluation trails.
- Herbarium specimen label transcription reimagined with large language models: Capabilities, productivity, and risks. Fancy software can transcribe herbarium labels.
- OliVaR: Improving olive variety recognition using deep neural networks. Fancy software can recognize olives.
- Reconstructing historic and modern potato late blight outbreaks using text analytics. Fancy software can track a pest epidemic.
- Evaluating responses by ChatGPT to farmers’ questions on irrigated lowland rice cultivation in Nigeria. Fancy software can be better than extension workers.
- Simulating pollen flow and field sampling constraints helps revise seed sampling recommendations for conserving genetic diversity. Fancy software and analysis can suggest changes to seed sampling strategies to take into account limited pollen flow.
Nibbles: Cider exhibit, Dog domestication, Nordic rye, Orkney barley, Tunisian wheat, IPR in Kenya, Future Seeds, Seed & herbarium resources
- The Museum of Cider has an exhibition on “A Variety of Cultures.”
- Nice podcast rounding up the latest on dog domestication.
- Useful summary of the history of rye in the Nordic countries since it replaced barley in the Medieval period.
- They didn’t give up barley in the Outer Hebrides.
- The Tunisian farmer goes back to wheat landraces (I think).
- The Kenyan farmers who want to exchange landraces.
- El Colombiano visits Future Seeds, evokes The Walking Dead.
- Seed saving resources from the California Seed Bank and the herbarium at the University of California, Berkeley.
Brainfood: Archaeology edition
- Early human selection of crops’ wild progenitors explains the acquisitive physiology of modern cultivars. The high leaf nitrogen, photosynthesis, conductance and transpiration of crops was already there in their wild relatives, the first farmers just happened to domesticate greedy plants.
- The impact of farming on prehistoric culinary practices throughout Northern Europe. When the first farmers arrived in northern Europe armed with their greedy plants, they learned a lot about food from the local hunter-fisher-gatherers, and vice-versa, but without much interbreeding. Jeremy interviews one of the authors on his podcast.
- Early contact between late farming and pastoralist societies in southeastern Europe. There was extensive interbreeding between farmers and the local transitional foragers/herders before with the expansion of pastoralist groups into Europe from the Eurasian steppes around 3300 BC.
- Isotopes prove advanced, integral crop production, and stockbreeding strategies nourished Trypillia mega-populations. The earliest European mega-settlements, in Ukraine and Moldova, from around 4000 BCE, integrated greedy crops and generous domesticated livestock.
- Inference of Admixture Origins in Indigenous African Cattle. Following introduction from the Near East, domesticated cattle got admixed with a North African extinct aurochs before spreading throughout Africa.
- Flax for seed or fibre use? Flax capsules from ancient Egyptian sites (3rd millennium BC to second century AD) compared with modern flax genebank accessions. Fibre first.
- Revealing the secrets of a 2900-year-old clay brick, discovering a time capsule of ancient DNA. DNA from 34 plant groups were detected inside an old brick when it happened to break.
- Making wine in earthenware vessels: a comparative approach to Roman vinification. Comparison with modern counterparts shows that Roman clay jars for storing wine were integral to the process. No word on whether there was any ancient DNA in the clay.
- Breadfruit in the Pacific Islands, its domestication and origins of cultivars grown in East Polynesia and Micronesia. Spoiler alert: they came from Polynesian Outlier Islands.
Canaries in the genetic coal mine
Specialism in science being what it is, it’s understandably unusual to see papers which combine combine analysis of genetic diversity in humans over time with that of crops, or indeed livestock. It’s less understandable why it should also be unusual in science journalism, and examples should be celebrated. So hats off to Warren Cornwall for his very readable synthesis in Science of the history of human and crop genetic diversity in the Canaries over the past two thousand years. Well worth a read.
References
Brainfood: CGIAR impacts, Alternative ag, Landscape simplicity, Biocultural diversity, PPP, Bioversity & food security, Landrace legislation, Coffee ABS, Useful plants
- The economic impact of CGIAR-related crop technologies on agricultural productivity in developing countries, 1961–2020. In 2020, modern varieties bred by CGIAR or developed by other institutions using CGIAR germplasm were sown on about 190 M ha, about 26% of the total harvested area of these crops in developing countries, and 43% of the total area sown with modern varieties for these crops in developing countries. Yes, cool, but…
- Farming practices to enhance biodiversity across biomes: a systematic review. Less intensive practices generally enhance biodiversity.
- Effects of landscape simplicity on crop yield: A reanalysis of a global database. Simplifying landscapes is associated with lower rates of pollination, pest control and other ecosystem services, and lower crop yields.
- Biocultural diversity and crop improvement. Crop improvement can enhance crop diversity, but doesn’t always.
- Collaboration between Private and Public Genebanks in Conserving and Using Plant Genetic Resources. Vegetable breeding companies can contribute to the conservation of crop diversity by public genebanks, but it takes work on both sides.
- Eight arguments why biodiversity is important to safeguard food security. It’s not “stop hunger first, then worry about diversity afterward”. Or it shouldn’t be.
- Landrace legislation in the world: status and perspectives with emphasis in EU system. Policy can support the conservation and use of landraces. Or not. It’s a choice.
- Convention on Biological Diversity (CBD) and the Nagoya Protocol: Implications and Compliance Strategies for the Global Coffee Community. Maybe they should consider the Plant Treaty approach?
- The global distribution of plants used by humans. 35,687 of them, and their richness is negatively correlated with protected areas.