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Nibbles: Median strips, Vitamin A, Mapping in Kenya, Chaffey, Small farms, Rennell Island coconuts, Sweet potato breeding, Acacia nomenclature, Crop models, Pulque, Fruits

Mapping Australian biodiversity

I finally got around to having a go at the Atlas of Living Australia. Very nice. You can make, and download images of, pretty maps of species distributions, Glycine in this case.

And you can mash that up with lots of different environmental layers, such as protected areas, as below.

There are nifty spatial analysis tools built in, to help you predict species distributions based on climate, for example, or explore the range of adaptation of a taxon. You can contribute to the data through citizen science projects. And much more. Well worth exploring.

What you can’t do — or at least I couldn’t find a way of doing it — is export the species distribution data to a kmz for use in Google Earth. Something I’ve complained about before for other biodiversity portals. Maybe someone out there will tell us why that is. ((Ok, well, actually there’s another thing. It would be nice to be able to separate taxa by colour in the scattergrams. The one above shows the whole Glycine genus, but I’m sure the different species will cluster separately to some extent. And downloading the data doesn’t help, as for some reason taxon name didn’t come along with the environmental data. Teething problems?))

One final thing. It’s a great idea to feature a number of “themes” on the atlas website, to get people started. At the moment it is things like wattles, “iconic species” and ants. Why not crop wild relatives?

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Wallow Fire (may) threaten (some) wild beans. Maybe.

There’s a really bad fire spreading in Arizona. ((NASA Earth Observatory image created by Jesse Allen, using data provided courtesy of the University of Wisconsin’s Space Science and Engineering Center MODIS Direct Broadcast system. Caption by Holli Riebeek.))

You can donwload all kinds of stuff about it, and even post your experiences of it on Facebook. But can you find out whether any crop wild relatives are threatened by it? Well, sure: all you have to do is go off to GBIF, and choose a likely genus (Phaseolus, say), and download the records, and mash them up in Google Earth with the latest fire perimeter data or whatever. ((And can I take this opportunity of thanking Google for the Google Earth license?)) Like I’ve done here:

Coming in closer, and using the NASA GeoTIFF instead of the normal Google Earth imagery, you can put yourself in the position of being able to make some reasonably intelligent guesses about what might be happening to some of these populations, and the genepool as a whole in the area:

But what I really meant is that there ought to be a way to do this automagically, or something. Anyway, it is sobering to reflect that while all hell is breaking loose in Arizona, not that far away to the northeast, in the peaceful surroundings of the Denver Botanical Garden, Anasazi beans are enjoying their day in the sun, utterly oblivious of the mortal threat faced by some of their wild cousins. It’s a cruel world. And there’s a point in all this about the need for complementary conservation strategies that’s just waiting to be made. Isn’t there?