- Crop-Climate Suitability Mapping. Yes, another one. I feel a proper post coming on.
- Tweet from Sean Hoban on ex situ sampling strategies. I feel a proper post coming on.
- Proper blog post explains a really complicated rice domestication paper in about a page.
- Proper podcast from Jeremy on, among other things, why coffee leaf rust is not why the Brits drink tea.
- Not sure if this is blog post, but it’s a really good example of weaving together (see what I did there?) different pieces of work on the wool dogs (sic) of the Pacific NW.
Brainfood: Sorghum lodging, GR wheat, Wild potato core, Wild tomato structure, Protected areas, Biodiversity agreements, Malt archaeology, Hittite archeology, Seed traders, Peasant networks, Seed storage, Mesoamerican crop origins, Intensification, Cattle breeds, Pig domestication, Rice barcodes, Potato history, Rice spread
- Large-scale genome-wide association study reveals that drought-induced lodging in grain sorghum is associated with plant height and traits linked to carbon remobilisation. To reduce lodging, better to select for stay-green (delayed leaf senescence) than for short stature and lodging resistance per se. Here’s a Twitter thread by one of the authors summarizing the findings.
- Green revolution ‘stumbles’ in a dry environment: Dwarf wheat with Rht genes fails to produce higher grain yield than taller plants under drought. At least it doesn’t lodge, though, right?
- A Core Subset of the ex situ Collection of S. demissum at the US Potato Genebank. From 149 to 38, keeping 96% of all marker diversity.
- Migration through a major Andean ecogeographic disruption as a driver of genotypic and phenotypic diversity in a wild tomato species. I guess if you were going to make a core collection for this you could do worse than sample ecogeographically diverse and isolated spots. Tricky to conserve in situ though.
- DNA barcoding of Oryza: conventional, specific, and super barcodes. 6 hypervariable regions in the chloroplast genome can serve as rice-specific DNA barcodes. Assuming you agree on species concepts in the first place.
- A “Global Safety Net” to reverse biodiversity loss and stabilize Earth’s climate. The 50% of the Earth to save to save the Earth.
- Three Key considerations for biodiversity conservation in multilateral agreements. Plan, model, assign responsibility.
- Mashes to Mashes, Crust to Crust. Presenting a novel microstructural marker for malting in the archaeological record. Aleurone cell breakdown in archaeobotanical remains is a robust indicator of beer-making. I bet they find it everywhere now.
- The agroecology of an early state: new results from Hattusha. Huge underground grain silos, with each container holding grain from multiple sites, which could be evidence of tax-paying. But no word on beer.
- Informal Seed Traders: The Backbone of Seed Business and African Smallholder Seed Supply. Lots of room for engagement, and considerable upside. If I were to pick out just one high-potential intervention, it would be providing training in seed testing.
- Restoring cultivated agrobiodiversity: The political ecology of knowledge networks between local peasant seed groups in France. I’m sure they’re testing their seeds.
- A Protective Role for Accumulated Dry Matter Reserves in Seeds During Desiccation: Implications for Conservation. Cells must have >35% dry matter to be able to withstand desiccation.
- Multiple lines of evidence for the origin of domesticated chili pepper, Capsicum annuum, in Mexico. It looks like we — inexplicably — missed this the first time around. Chilli, maize and beans originated in different parts of Mexico.
- Ecological intensification and diversification approaches to maintain biodiversity, ecosystem services and food production in a changing world. Though you can change one thing at a time, it’s better to redesign the whole system. But is the better the enemy of the good?
- Refining the genetic structure and relationships of European cattle breeds through meta-analysis of worldwide genomic SNP data, focusing on Italian cattle. 2 groups among Italian breeds: North-Central breeds linked to Alpine and Iberian breeds, and Podolian-Sicilian breeds with links to the Balkans.
- The Archaeology of Pig Domestication in Eurasia. Independent domestication in northern Mesopotamia by 7500 BC (extensive management) and China by 6000 BC (maybe intensive); failed to take off in Japan, for interesting reasons.
- Vegetative States: Potatoes, Affordances, and Survival Ecologies. The potato has both helped to underpin and resist state coercion. The Hittites would have worked something out, though, I feel.
- Holocene coastal evolution preceded the expansion of paddy field rice farming. Rice only moved south from the lower Yangtze 2-3000 years ago, once costal land opened up. No word on affordances.
Brainfood: Cali ag, Wild potato double, Enset diversity double, Banana collecting, Disease models, Wild resistance, SP drought, Wheat blast, MAGIC wheat, Biological control, Teosinte, Artemisia, Multiple cropping, Mungbean value, Traditional crops, Singing dogs, Biodiversity metric, Hotspots
- Projected temperature increases may require shifts in the growing season of cool-season crops and the growing locations of warm-season crops. In California’s Mediterranean climate, cool season crops will have to shift in time, and warm-season crops in place.
- A “Mega Population” of the Wild Potato Species Solanum fendleri. Large population, safe, accessible and very diverse. Who needs genebanks, right?
- Survival of Solanum jamesii Tubers at Freezing Temperatures. Very unusual trait in both the crop and the wild relatives, apparently.
- Diversity and uses of enset [Ensete ventricosum (Welw.) Cheesman] varieties in Angacha district, Southern Ethiopia: call for taxonomic identifications and conservation. 55 varieties in 75 homegardens, 88 in the field genebank, many in only one or the other.
- Impact of Climate Change on the Diversity and Distribution of Enset (Ensete ventricosum (Welw) Cheesman) in Ethiopia: A Review. Some are moving, some are dying. I guess we really need in vitro and cryo after all.
- Filling the gaps in gene banks: Collecting, characterizing and phenotyping wild banana relatives of Papua New Guinea. Much diversity of banana ancestor still not in genebanks, but people are on the job.
- Modeling the Impact of Crop Diseases on Global Food Security. Genetic diversity is not enough.
- What natural variation can teach us about resistance durability. That genetic diversity is not enough, apparently.
- Wheat blast: a new threat to food security. We have the genes to fight it, but they won’t be enough.
- Limited haplotype diversity underlies polygenic trait architecture across 70 years of wheat breeding. I hope at least those genes can be found in this MAGIC population based on European bread wheat varieties from the past few decades.
- Potential Short-Term Memory Induction as a Promising Method for Increasing Drought Tolerance in Sweetpotato Crop Wild Relatives [Ipomoea series Batatas (Choisy) D. F. Austin]. Wild sweet potatoes have the genes to remember drought stress, and hence cope with it better. Will they be enough though?
- Ecological pest control fortifies agricultural growth in Asia–Pacific economies. Biological control has been worth USD 15-20 billion a year for non-rice crops over the past 100 years across 23 countries. But how much is the interaction with genetic diversity worth?
- Evaluation of the contribution of teosinte to the improvement of agronomic, grain quality and yield traits in maize (Zea mays). Wild relative not just a source of stress resistance, could be useful for yield potential too.
- “It may also have prevented churchgoers from falling asleep”: southernwood, Artemisia abrotanum L. (fam. Asteraceae), in the church bouquet, and its contemporary presence as a heritage plant in Sweden. The fragrance lingers.
- Multiple cropping systems of the world and the potential for increasing cropping intensity. Multiple cropping on 12% of total agricultural area, which could increase, but probably not as much as was thought.
- Impact and returns on investment of mungbean research and development in Myanmar. Four varieties coming out of international research created economic gains of USD 1.4 billion from 1980-2016. That’s a ROI of about 90, but it took 20 years to kick in.
- Are Traditional Food Crops Really ‘Future Smart Foods?’ A Sustainability Perspective. Well, they could be, but maybe we don’t have 20 years.
- New Guinea highland wild dogs are the original New Guinea singing dogs. …which are therefore not extinct in the wild as used to be thought. Or so the DNA says.
- WEGE: A new metric for ranking locations for biodiversity conservation. That’s “Weighted Endemism including Global Endangerment,” and it hasn’t been tried on plants. Yet.
- Toward Unifying Global Hotspots of Wild and Domesticated Biodiversity. They overlap a lot but not completely. Expect WEGE to be applied at some stage.
Brainfood: Bending the curve edition
- Bending the curve of terrestrial biodiversity needs an integrated strategy. Meaning: (i) sustainable agricultural intensification, (ii) trade, (iii) less food waste, (iv) more plant-based human diets, and (v) more and better protected areas.
- The carbon opportunity cost of animal-sourced food production on land. See (iv) above.
- Just ten percent of the global terrestrial protected area network is structurally connected via intact land. See (v) above.
- Cropland expansion in the United States produces marginal yields at high costs to wildlife. See (i) above.
- A cultivated planet in 2010 – Part 1: The global synergy cropland map. Gotta know where the cropland is before you can do (i) above.
- Advances in plant phenomics: From data and algorithms to biological insights. Fancy maths can really help with (i) above.
- Retrospective Quantitative Genetic Analysis and Genomic Prediction of Global Wheat Yields. Different fancy maths shows that CIMMYT’s Obregon wheat testing site can really help with (i) above.
- Diversity analysis of 80,000 wheat accessions reveals consequences and opportunities of selection footprints. Here’s some stuff that wheat breeders can use to develop new materials to test at Obregon using phenomics, genomics and fancy maths.
- First report on cryopreservation of mature shoot tips of two avocado (Persea americana Mill.) rootstocks. This should help with (iv) above. Eventually, work with me here.
- Bread and porridge at Early Neolithic Göbekli Tepe: A new method to recognize products of cereal processing using quantitative functional analyses on grinding stones. Ahem. Well… No, sorry, I got nothing.
Nibbles: Taxonomic web, Oz restoration tools, ABS in India, Colombian seeds, Old date, Diverse cereals
- R package for roaming around the web and collating taxonomic information.
- Cool tool for climate matching and tree restoration seed targeting in New South Wales. Probably needs more than a Nibble.
- Results of webinar on ‘Implementation of Access to Plant Genetic Resources and Benefit Sharing (ABS)’ in India. With video goodness.
- The whole Colombian seed conservation network on one annoying website.
- Those really old dates bear fruit at last. Do you remember the paper on the genetic diversity aspects?
- Growing a rye landrace on a Swedish island for organically certified seed. And more.