The return of ex situ

ResearchBlogging.org

Although some have emphasized the need to breed crops for future climatic conditions, much of the world’s farming population relies on landrace populations, not formal breeding networks.

Undeniable, of course, and a good reason to not forget landraces (farmers’ local varieties) when thinking about how agriculture will (or will not) adapt to climate change. The new paper by Kristin Mercer and Hugo Perales in Evolutionary Applications from which the above quotation is taken (minus the references for clarity, as with all subsequent quotes) won’t let you forget. ((Mercer, K., & Perales, H. (2010). Evolutionary response of landraces to climate change in centers of crop diversity Evolutionary Applications DOI: 10.1111/j.1752-4571.2010.00137.x))

The authors look in some detail at each of the possible responses that landraces may have to climate change. They could simply “adjust their phenotype” (plasticity). Or they could adjust their genotype, otherwise known as evolution, and thus “keep up” with the climate. They could also migrate to more hospitable places. And, finally, they could die out (extinction).

What will determine which of these routes any particular landrace follows? Mercer and Perales think two main factors need to be considered: the level and pattern of adaptive genetic variation in the landrace, and the details of how climate, and therefore selection pressures, will actually change. They say they recognize that what farmers do will also determine the outcome, but somewhat disappointingly leave a discussion of that to a later date. They list about a dozen quite specific research questions that would need to be tackled to “understand how landraces in crop centres of diversity may respond to climate change,” which I’ll reproduce in full for those who don’t have access to the paper (they’re in Box 1).

Genetic structure

• Is available genetic variation appropriate for evolutionary response to climate change, especially for selfing or clonal crops?
• At what rate will evolution proceed given heritability of traits and strength of selection?
• Might there be constraints on evolution to multiple environmental changes given the genetic correlations among traits?
• Is there capacity for evolution of plasticity?
• Might populations be plastic in response to climate change, especially for selfing or clonal crops?
• Will different types within a species, or landraces from different regions, respond differently?
• Will adaptive or novel variation be available to populations for evolution based on patterns of gene flow and mutation rates?
• Would gene flow from improved varieties improve or reduce the evolutionary potential or plastic response of landrace populations?

Climate change patterns

• What aspects of climate change will impose directional, disruptive, or fluctuating selection?
• Could selection be strong enough to reduce genetic variation within or among populations?
• Could it reduce effective population size or cause major mortality, which should reduce genetic variation?
• Would yearly variability in selection reduce genetic variation or lead to greater plasticity?

That’s a nice research agenda to be getting on with. I was particularly interested in three specific observations made by the authors. The first is that “[f]armer-mediated selection may … contradict natural selection.”

…farmers could select for seed characteristics, such as grain size, which, if negatively correlated with the tolerance to heat during the grain filling stage, could reduce the populations’ productivity in high temperatures.

The second is that

Migration or gene flow could facilitate adaptation and maintenance of productivity with climate change because gene flow can introduce novel variation into landrace populations on which selection can act. (Mutation can also introduce novel and potentially adaptive variation, which could be selected upon as climate shifts.) In contrast, gene flow could constrain adaptation if there is repeated introduction of alleles from maladapted landrace populations.

Where would such non-maladapted material come from? The authors don’t really discuss this question, but we suggested in a recent paper that in many situations the source may well be a different country.

Finally, the authors point out that “since climate change is promised to introduce new extremes in temperature,” the resulting “strong bouts of selection” are quite likely to cause extreme narrowing of genetic diversity in landraces when they don’t cause their extinction.

These points, and indeed others, could only lead to one conclusion as far as I was concerned, and I read on anxiously to see whether the authors would agree. Finally, on the penultimate paragraph, the money quote arrived:

Ex situ conservation could regain primary importance despite the fact that it is an already over-taxed system. Yet climate change promises to complicate the decisions of which locations are most appropriate for grow-outs.

Remember that the paper is written very much from the perspective of in situ conservation. To see the importance of genebanks extolled so clearly in such a context, and the complexity of their operations highlighted to boot, was very welcome, and I must say somewhat unexpected. Are we beginning to move back towards a recognition of the essential complementarity and inter-dependence of ex situ and on farm conservation?

Nibbles: Hemp, Wheat, Wheat, Conservation, Liberia, Carnival, Climate change, Satoyama, Leafy greens

Watching TV in the Kolli Hills

More from India’s Kolli Hills and the efforts to reinvigorate millet cultivation there. A recent paper by anthropologist Elizabeth Finnis of the University of Guelph in Ontario, Canada is described in PLEC Digest. The paper is intriguingly titled “Now it is an easy life” ((E. Finnis 2009. “Now it is an easy life”: women’s accounts of cassava, millet and labor in South India. Culture and Agriculture 31(2): 88-94.)) and the editors at PLEC take this one step further by calling their post “So I can watch TV.”

The point is that there is a very good reason why millets are much less grown than formerly, despite cultural attachment, better nutritional composition and a much-preferred taste. They are a bother to prepare.

Rice has replaced millet as the main staple, freeing the women of a major and onerous morning job. Other income from cassava, and from work outside the local community, is used to vary the diet, pay for children’s education, and buy other commodities. These include bicycles and, for a minority as yet, prestigious goods such as TV sets and motor cycles. There is more time for social activity, and, as one young woman put it, there are more “times when we are free. So I can watch TV” (p.91).

So what to do? Apart from collecting the millets and storing them away in a genebank, that is. The author of the PLEC piece — though not Finnis — does refer to the well-known work of the M.S. Swaminathan Research Foundation:

The project has given considerable attention to marketing issues, and began to provide involved communities with mechanical mills suitable for the dehusking of millet (which has thicker husks than rice) (Gruere et al 2009). However, up to the time of Finnis’ report, these had not reached the part of the Kolli hills in which she worked. In her paper, Finnis does not specifically discuss the Swaminathan project, but suggests that any project involving millet cultivation revival, especially for household use, needs to consider demands on women’s labour, and women’s labour preferences.

Here’s the bottom line:

While irrigation and market improvements could help, it would be reduction of processing time from hours to minutes made possible by mechanical hullers that might achieve most, “allowing women to take advantage of both their preferences for reduced labour loads and for the taste of millets in their everyday diets” (p. 92).

Well that doesn’t sound too difficult to me.

Nibbles: Sugarcane breeding, Caterpillar mushroom, Saharan honeybees, Vodka taste, Cotton genetic resources, African savannah ag, Organic videos