- Badass sheep genomes sequenced.
- FAO assesses drylands.
- Sun shines on enkir again.
- Beans good for anemia. Keep you regular too.
- Jacksy‘s the next breadfruit.
- De-extinction is no back door to conservation.
Ancient agricultural DNA everywhere
Heady days for ancient DNA researchers. There have been two major papers in the past month looking at the DNA of Neolithic farmers. Back in June, a huge research consortium published “The genetic structure of the world’s first farmers” as a preprint in bioRxiv, with subsequent write-up in Nature. And now a different huge consortium comes out with “Early Neolithic genomes from the eastern Fertile Crescent,” in Science. That also got widely picked up.
Don’t ask me why two separate research groups need to be working on basically the same problem, in basically the same way. I suppose they’re using somewhat different methods on different material. I really couldn’t tell you whether it would have been better to pool the material, or standardize the methods, or indeed both. Maybe someone out there will tell us. In any case, it’s reassuring, I suppose, that the two studies came to broadly similar conclusions, namely that there were genetic differences among early farmers, and that genetically distinct people from different parts of the Fertile Crescent migrated north into Europe and eastwards further into Asia. Which in turn suggests to some that the origins of agriculture may be described as “federal”:
Different and genetically distinct populations were all engaged in this same general project, albeit exchanging ideas with each or other or sometimes coming up with the same idea independently.
Meanwhile, sequencing of DNA from a 6000-year-old barley from the Dead Sea shows close similarity with varieties still grown in the southern Levant and Egypt. Intriguing to speculate whether a similar study of material from the Zagros Mountains would show a parallel pattern to the human DNA. But will it need a different group of researchers to do it.
Nibbles: African fruits, Old apple, Ancient barley, GRAIN study, Desertification, Biodiversity loss
- ICRAF helps us understand little-understood African fruit trees.
- The apple is pretty well understood, but this one important, 200-year-old tree is dying. Tissue culture to the rescue.
- I see your 200-year-old-tree and I raise you 6000-year-old barley.
- GRAIN takes aim at FTAs.
- Desertification may not be a thing.
- Biodiversity loss is, though, right?
Brainfood: Ghana cassava, Paspalum hybrids, Wild safflower, Genotyping for phenotyping
- Tracking crop varieties using genotyping-by-sequencing markers: a case study using cassava (Manihot esculenta Crantz). A third of cassavas found on Ghanaian farms are released varieties, though you’d never know it from just looking at the names.
- Interspecific hybrids between Paspalum plicatulum and P. oteroi: a key tool for forage breeding. P. oteroi is promising, but asexual. But there’s a way around that…
- Phylogenetic position of two endemic Carthamus species in Algeria and their potential as sources of genes for water use efficiency improvement of safflower. They’re actually in a different genus, but could still be useful.
- Genomic Prediction of Gene Bank Wheat Landraces. “…for the two populations of landraces included in this study [Mexican & Iranian], genomic predictions were generally of a magnitude that could be very useful for predicting the value of other accessions in the gene bank and that could be useful in breeding.”
Nibbles: Maize domestication, Seaweed as food, Holy plants, Pre-Columbian Amazon, Pulses, Myanmar rice, Ghana cassava, Chocolate festivities, Tobacco biofuel, Evidence base, Brazilian agrobiodiversity
- Maize domestication video from CONABIO.
- Why has a seaweed never been domesticated?
- Any seaweeds mentioned in the Bible?
- Series of talks on ancient Amazonia.
- Africa needs pulses.
- Myanmar needs salinity tolerant rice.
- 30% of Ghanaian cassavas are improved varieties, but you wouldn’t know it from their names.
- Wait, what, we missed World Chocolate Day?
- Tobacco for airplanes, no warning label required.
- Latest list of conservation interventions that work tackles forests.
- Brazil lists nutritious native species.