- Maize geneticist and forage breeder among USDA’s Agricultural Research Service Scientist of the Year winners.
- BBC man lands top Kew job.
- Elinor Ostrom RIP.
- If the wormwood don’t get you, the groundsel will. A tale of two wild Asteraceae.
- Foxtail Millet Offers Clues for Assembling the Switchgrass Genome. So that’s what millet is good for.
Would you pay €50 per accession?
Bert Visser, director of the Centre for Genetic Resources, the Netherlands (CGN) has just sent the message below to colleagues in the European crop genebank network, and suggested that readers of this blog might also have an opinion. If you have, do leave it here as a comment.
Like so many genebanks, since a number of years CGN has been confronted with increasing costs and diminishing budgets for its core genebank tasks (collecting, regeneration, storage, evaluation, documentation, distribution). Moreover, CGN has observed a considerable increase in the number of distributed samples resulting in increased handling costs and accelerated exhaustion of our stocks with consequently higher yearly regeneration costs.
In order to manage a widening financial gap, in consultation with the Ministry of Economic Affairs, Agriculture and Innovation, CGN is considering a number of measures including a revision of seed viability testing protocols (based on recent findings regarding the storability of seeds under genebank conditions) and a much tighter planning of regeneration and acquisition activities. Furthermore, the private sector will be approached to discuss options for the sector’s continued involvement in regeneration of CGN germplasm.
In addition, we are considering a measure for which we seek your comments and advice. This measure regards the introduction of a handling fee for the distribution of CGN germplasm. The Treaty, in its Article 12, allows for a handling fee, whereas the distribution conditions under AEGIS do not exclude the possibility of such a fee. Globally, only few genebanks have introduced handling fees, notably NIAS (Japan) and AVRDC (global; vegetables). CGN handling fees would not apply to partners that carry out regeneration tasks for CGN, neither to NGOs.
CGN is considering handling fees that could amount up to € 50 per accession. Whereas we consider this a modest amount per accession, the request for large numbers of samples may be strongly discouraged. Therefore, discount fees for larger numbers of requested samples, or for pre-packed sets (core or elite collections) will be considered. In any case, a handling fee might encourage potential users to consider in more detail which accessions are really needed in planned research or breeding programmes, and may prevent poorly motivated requests or intended duplications of CGN germplasm in other collections.
We realise that any unilateral action of CGN may have an impact on you: users may shift from CGN to you assuming your distribution is still free, and you might be asked by your own government to introduce fees as well. There may be other consequences that we have not taken into account yet.
In any case, we do not wish to introduce a unilateral handling fee overnight and have not yet taken any definite decision, and this is why we are consulting you as our European colleagues to have your opinions and feed-back. In particular, we would be interested to hear of any other discussions on the introduction of a handling fee.
Brainfood: Barcoding, DArT for beans, SNOPs for Cacao, Aquaculture impacts, Cassava GS, Cereals in genebanks, Symbiosis
- A critical review on the utility of DNA barcoding in biodiversity conservation. Not bad, but not by itself.
- A whole genome DArT assay to assess germplasm collection diversity in common beans. It works, and can distinguish Andean from Mesoamerican accessions.
- Optimization of a SNP assay for genotyping Theobroma cacao under field conditions. It works, and is being used in Ghana.
- A Global Assessment of Salmon Aquaculture Impacts on Wild Salmonids. Meta-analysis shows farming salmon and trout in an area has in general been bad for their wild relatives there.
- Genome-wide selection in cassava. High correlations between SNPs and several phenotypic traits of interest to breeders mean that selection time could be cut by half. Could.
- Cereal landraces genetic resources in worldwide GeneBanks. A review. We don’t have enough data. On so many different levels.
- Coevolutionary genetic variation in the legume-rhizobium transcriptome. Wait, does this mean we should be conserving Rhizobium too?
The final word on why biodiversity loss is bad
There’s a pile of papers on my desk. In a corner of my desk, actually, where I don’t have to look at them too often. Here are their titles:
- Minimal increase in genetic diversity enhances predation resistance.
- Plant diversity improves protection against soil-borne pathogens by fostering antagonistic bacterial communities.
- High plant diversity is needed to maintain ecosystem services.
- The functional role of producer diversity in ecosystems.
- Why intraspecific trait variation matters in community ecology.
- Does plant diversity benefit agroecosystems? A synthetic review.
- Genotypic richness and dissimilarity opposingly affect ecosystem functioning.
I just added one yesterday: “Meta-analysis at the intersection of evolutionary ecology and conservation.” You’ve spotted the trend, right? I was planning to write about the whole bunch of them together, a mega-post on the latest thinking on the relationship between biodiversity on the one hand and ecosystem health on the other. They’ve been there for months. I just haven’t been able to get round to them, what with one thing and another. Like work, mainly. And maybe a bit of laziness.
But there’s an upside to prevarication. You wait long enough to do something, if the thing is really important, you’ll find someone does it for you. And so it has proved on this occasion, because “Biodiversity loss and its impact on humanity” has just come out in Nature, and it provides a comprehensive review of the sort of papers that have been sitting in that corner of my desk, lots of them, going back years.
Which means all I need to do here is further summarize the already admirably succinct synthesis that the authors provide. 1 And that I think I can do in a few bullet-points:
- Loss of biodiversity (really loss of diversity in functional traits) decreases the efficiency and stability of ecosystems.
- The impacts of biodiversity loss on ecosystem functioning are big, accelerating and predictable.
- Biodiversity is predictably positively correlated with the provisioning of some ecosystem services, but the data in the case of other services is either mixed, insufficient or runs counter to expectation.
And yes, the dataset included crops, and here’s the snippet of the summary table that deals with agrobiodiversity and ecosystem services: 2
No doubt about the importance of genetic diversity to yield, though surprisingly mixed results for species diversity. But look at the numbers of data points involved (N): 575 data syntheses (DS) for genetic diversity and 100 for species diversity. Makes that pile of papers I’ve been avoiding look rather puny. And me not just a bit lazy.
Nibble: South Sudan seed fair, Seed cinema, Dandelion diversity, Nature’s value graphic, Cocaine synthesis, Livestock farming, Visualizing conservation trade-offs, Vertical farms, Sequence fungi
- A seed fair in South Sudan. Good idea, but why only certified seed?
- Maybe they should watch Seeds of Freedom. Well, maybe.
- Genetic diversity is important! Settle down, we’re talking dandelions.
- Nature’s value includes crops. Phew. Dandelion is a crop, isn’t it?
- Talking about value… She don’t lie, she don’t lie, she don’t lie…
- And again. Award-winning research on livestock farming’s value to developing countries. And its dark side.
- Both of which could of course be usefully visualized by the people involved.
- Vizualise this! Nightmare skyscraping vertical farms, for real.
- Today’s jetpack request comes from Sophien Kamoun, stimulated by ravishing fungi.
