- A critical review on the utility of DNA barcoding in biodiversity conservation. Not bad, but not by itself.
- A whole genome DArT assay to assess germplasm collection diversity in common beans. It works, and can distinguish Andean from Mesoamerican accessions.
- Optimization of a SNP assay for genotyping Theobroma cacao under field conditions. It works, and is being used in Ghana.
- A Global Assessment of Salmon Aquaculture Impacts on Wild Salmonids. Meta-analysis shows farming salmon and trout in an area has in general been bad for their wild relatives there.
- Genome-wide selection in cassava. High correlations between SNPs and several phenotypic traits of interest to breeders mean that selection time could be cut by half. Could.
- Cereal landraces genetic resources in worldwide GeneBanks. A review. We don’t have enough data. On so many different levels.
- Coevolutionary genetic variation in the legume-rhizobium transcriptome. Wait, does this mean we should be conserving Rhizobium too?
Brainfood: Agronomy, Endophytes, Breadfruit morphology, Setaria genetic diversity, Yeast epigenetics, Wild rice
- Avenues to meet food security. The role of agronomy on solving complexity in food production and resource use. Wait, what, it’s not all about the breeding?
- Population studies of native grass-endophyte symbioses provide clues for the roles of host jumps and hybridization in driving their evolution. Wait, what, we have to conserve these things too now?
- Morphological diversity in breadfruit (Artocarpus, Moraceae): insights into domestication, conservation, and cultivar identification. Cool, we now have a multi-access Lucid key to help us recognize varieties.
- Geographical variation of foxtail millet, Setaria italica (L.) P. Beauv. based on rDNA PCR–RFLP. Geographic differentiation, centre in East Asia, evidence of migration, yada yada.
- Within-genotype epigenetic variation enables broad niche width in a flower living yeast. Wait, what, now we have to document the epigenome too?
- Phylogeography of Asian wild rice, Oryza rufipogon: a genome-wide view. Fancy markers come through where lesser breeds caused confusion. Two groups, clinally arranged, with the China-Indochina group close to indica, neither close to japonica. So one, Chinese, domestication event, yada yada.
Brainfood: Healthy berries, Maghrebi arpicots, Visualizing DNA relationships, Below-ground plant diversity, European apples, Rice storage, Barley movement
- Antiglycation activity of Vaccinium spp. (Ericaceae) from the Sam Vander Kloet collection for the treatment of type II diabetes. The tropical ones are better. But who is Sam Vander Kloet, I hear you ask?
- Genetic diversity and differentiation of grafted and seed propagated apricot (Prunus armeniaca L.) in the Maghreb region. Well, there really isn’t much.
- Trees and/or networks to display intraspecific DNA sequence variation? And.
- Below-ground plant species richness: new insights from DNA-based methods. Theory says it will be higher than above-ground richness.
- New Insight into the History of Domesticated Apple: Secondary Contribution of the European Wild Apple to the Genome of Cultivated Varieties. No genetic bottleneck, and lots of contribution from local wild relative, making European apples closer to that than to Central Asian ancestor.
- Viability of Oryza sativa L. seeds stored under genebank conditions for up to 30 years. Genebanks work.
- Barrier analysis detected genetic discontinuity among Ethiopian barley (Hordeum vulgare L.) landraces due to landscape and human mobility on gene flow. Barriers to human movement, rather than mere distance, lead to genetic differentiation in barley.
Brainfood: Spanish emmer, Lathyrus breeding, Vitis in N Africa, European tree niche models over time
- Remnant genetic diversity detected in an ancient crop: Triticum dicoccon Schrank landraces from Asturias, Spain. Strong geographic differentiation even at small scales.
- Grass pea (Lathyrus sativus): Is there a case for further crop improvement? Yes, but then they would say that, wouldn’t they.
- Highly polymorphic nSSR markers: A useful tool to assess origin of North African cultivars and to provide additional proofs of secondary grapevine domestication events. North African cultivars do not derive from North African wild strains. Did anyone really think they did? Well, I guess it’s good to have the data.
- Building the niche through time: using 13,000 years of data to predict the effects of climate change on three tree species in Europe. You have to take into account past distributions when predicting future ones.
Brainfood: Species prioritization, In situ costs, Mycorrhiza, Crop diversity indicator, Diet diversity indicator, Ag & Nutrition, Chestnut blight, Oyster translocation, Maize introgression, Italian asses, New hosts for pests
- Species vulnerability to climate change: impacts on spatial conservation priorities and species representation. Yes, you can focus on sensitive species, but it comes at the cost of representativeness.
- Estimating management costs of protected areas: A novel approach from the Eastern Arc Mountains, Tanzania. Those are $ costs per pixel on the map, which I’ve never seen before. Don’t think they took into account the effects of climate change, though. Maybe they should get in touch with the Aussies above?
- The use of mycorrhizal inoculation in the domestication of Ziziphus mauritiana and Tamarindus indica in Mali (West Africa). It would help.
- A new integrative indicator to assess crop genetic diversity. Includes varietal richness, spatial evenness, between-variety genetic diversity, and within-variety genetic diversity. Not much left, really. Anyway, remember this from last week? Anyone out there going to put 2 and 2 together?
- Assessing Nutritional Diversity of Cropping Systems in African Villages. A new tool! Different from the integrative indicator above! Anyone going to put 4 and 2 together?
- Agriculture-Nutrition Pathways Recognising the Obstacles. “The pathways between agriculture and nutrition seem to be laden with impediments, particularly in the form of intricate household preferences.” Those pesky preferences.
- The chestnut blight fungus world tour: successive introduction events from diverse origins in an invasive plant fungal pathogen. Asia to N. America to Europe, but more than once. All very complicated. The surprising thing is that low diversity and low admixture have nevertheless still resulted in success in disparate places. What fiendish molecular or biochemical mechanism is behind this? Only more research will show, natch.
- Translocation of wild populations: conservation implications for the genetic diversity of the black-lipped pearl oyster Pinctada margaritifera. Introducing some wild individuals near farms leads to more diverse farmed populations, right? Nope. The farmed populations are way diverse already and if anything the diversity is moving the other way.
- Maize x Teosinte Hybrid Cobs Do Not Prevent Crop Gene Introgression. That’s because the hybrid cobs break apart much more easily than maize.
- Detecting population structure and recent demographic history in endangered livestock breeds: the case of the Italian autochthonous donkeys. Microsatellites confirm existence of 8 breeds of Italian donkey, though there is also significant substructuring within each by farm. This apparently calls for a “synergic management strategy at the farm level,” which basically means using the breed as the unit of conservation but being careful about inbreeding.
- Evolutionary tools for phytosanitary risk analysis: phylogenetic signal as a predictor of host range of plant pests and pathogens. Work out host susceptibility by looking at existing pest preferences and phylogenetic distance from the stuff the pest is known to like.