Give farmers room to grow

Farmers conserve and improve the crop diversity around them. They have been doing it for millennia. Their livelihoods depend on it. But how much more might they be able to do?

Consider the coconut. Farmers know which palms have characteristics they value, but with ordinary open pollination they can choose the mother but not the father of future coconuts. A recent paper proposes relatively simple techniques that would allow farmers to control pollination and thus choose both parents and produce more predictable seednuts. It won’t turn them into breeders, but it could help them produce — and maybe even sell — better planting material.

Tamarind presents a different version of the same problem. Much of the African crop still comes from scattered, semi-wild trees. Harvesters know which trees are best, but turning a particularly good tree into a reliable source of planting material is hard. Seedlings don’t necessarily reproduce the parent’s characteristics, and tamarind takes years to mature. Grafting and other forms of vegetative propagation exist, but have not been widely adopted, according to a recent review.

There’s a nice example from southern Africa that gives a glimpse of what might be. Researchers are identifying exceptionally productive wild fruit trees in the miombo woodlands and cloning them through grafting and air-layering. A tree that might otherwise take around a dozen years to fruit can produce within four or five when propagated this way.

But it doesn’t have to be a researcher doing that. A farmer or harvester who knows a particularly productive tree, or one with especially good fruit, could propagate it through cloning rather than relying on whatever seedlings happen to arise.

Coconut and tamarind aren’t the same, and neither are the technologies needed. But the principle is similar. We sometimes fall into the error of thinking that conserving and improving crop diversity are things done for farmers, whether in a genebank, a breeding programme or a research station. But they already do these things. Sometimes they just need a little room to try doing them a little bit differently.

Nibbles: Bacon kitchen garden, Bison diversity, African herbaria, Mycorrhiza, China wild rice genebank, African seed laws

  1. Sir Nathaniel Bacon’s painting records the arrival of American crops in early modern England. And the cookmaid gets equal billing.
  2. North America’s bison survived near-extinction, but how much of its genetic diversity is left? Past and present DNA is helping reconstruct what was lost, with implications for how what remains is conserved and managed.
  3. China’s wild rice collection in Hainan now holds more than 15,000 samples. A genetic treasure trove, but its value ultimately depends on what breeders can make of it. Much like what’s left of bison diversity.
  4. Mycorrhizal fungi form vast underground networks that support plant life and store carbon. A new global map begins to show their extent, and just how much of this biodiversity remains overlooked.
  5. Africa’s herbaria hold centuries of botanical history, much of it still effectively invisible. Specimens can reveal shifting plant distributions and overlooked species. First, though, someone has to do the painstaking work of getting the data online.
  6. Africa has done painstaking work on seed laws, but getting good seed to farmers remains hard in practice. The gap between policy and delivery is stark, and commercial companies need to work alongside farmer-managed seed systems, not pretend they don’t exist.

The apples of our eye

Apples have been another recurring obsession on the blog, maybe because they make the conservation problem unusually tangible, and immediate. Pretty much everyone thinks they know what an apple is, but the diversity hidden behind that word is enormous, and not much visible in supermarkets. A lot of it may have disappeared, but you can pretty much guarantee a slew of heritage apple stories in the press come autumn (and so it begins), so I guess people care. Here’s a selection of posts about apples spanning 15 years. There’s a lot more out there in the archive for you to explore.

Let’s start at the beginning, or as close to it as the genetics can get us. In 2016’s The Adam and Eve of apples?, I discussed the wild apple forests of southeastern Kazakhstan, where all of the world’s apple varieties can be traced back to an ancestral population of Malus sieversii — spread, if you believe the more colourful tellings, by bears eating the sweetest fruit and pooping the seeds around the forest. As usual, though, the genetics turned out to be more interesting than the headline. The cultivated apple isn’t a simple straight line from one mother tree; it’s the product of a long history of movement, hybridization and exchange between wild and domesticated populations all along the old trade routes out of Central Asia.

But those forests are in danger. Back in 2009, in Wild fruit relatives threatened in Central Asia, I looked at how the wild relatives of apples and other crops were vanishing along with their habitat. Among them was Malus niedzwetzkyana, the remarkable red-fleshed apple of Kyrgyzstan. These aren’t just obscure wild trees: they represented genetic diversity that has already made its way into cultivated apples, and might still have something to offer breeders. That red-fleshed apple came back a year later in Not the world’s first red apple. A new red-fleshed variety was being breathlessly presented in the press as a novelty — not GM, just 15 years of patient crossing and 20,000 rejected seedlings — but nature had got there first. M. niedzwetzkyana has been doing red flesh for millennia.

The cultivated stock has its own story of loss. In 2009’s Saving an apple a day, I looked at the loss of American apple varieties, and at the people trying to rescue what remained. Thousands of named varieties had once been grown in the United States; only a fraction survived in orchards, collections and the memories of the people who knew what they tasted like. It was a nice illustration of a familiar conservation paradox: you can lose a lot of diversity without even noticing, because the supermarket keeps selling you apples.

However, that same year, a study added a wrinkle to the “thousands lost” narrative. In Lost apples found, Jeremy pushed back a little on the standard version of the story — the one where 6,800 of 7,100 named 19th-century American apple varieties are simply gone. A team from the University of Arizona and USDA had gone looking for ghosts among old apple trees on historic farmsteads in Arizona, Utah and New Mexico. Only 34 of the resulting genotypes matched a known variety. The other 110, spread across 160 trees, matched nothing on record. Some of those are probably unnamed seedlings that never had a name to lose in the first place. But some, surely, are the supposedly lost varieties everyone had given up on. Not extinct, just lurking.

Seven years on, the USDA apple folks came back with another version of the answer. In As American as apples, Gayle Volk summarized her and Adam Henk’s trawl through historic nursery catalogues, which turned up 891 named apple cultivars grown in the US before 1908. They went looking for the 150 that seemed to matter most. The payoff: 90% are still findable today, safely tucked away in genebanks, private collections or specialist nurseries. Only 51 high-priority cultivars remained unaccounted for in any collection. For now.

The lesson isn’t that genetic erosion doesn’t happen. It plainly does, and 30 fruit nurseries vanishing a year is not nothing. No, the lesson is that “extinct” is much harder to prove than “endangered,” and pomologists with their equivalent of a swab kit keep turning out to be more patient, and luckier, than we have any right to hope.

Conserving what’s left, of course, depends on people as much as on collections and gene sequencers. In 2014, I offered up Irish eyes smiling about apple conservation. The post was prompted by Michael Hennerty’s beautiful book on the Irish apple, but the real story was the people who had nurtured the 68 varieties documented in the book over the years. Conservation often depends on a motley collection of people keeping things alive long enough for some fancy institution to discover that they matter. A few years later, Jeremy went into much more detail on Irish apples on his podcast.

Institutions, though, can be just as precarious as the work of any orchard-keeper or amateur gardener. Across the Irish Sea, the story of the UK’s apple collection showed just how fragile even a major national genebank can be. The National Fruit Collection at Brogdale in Kent, with its hundreds of apple varieties, came under threat when its funding was thrown into doubt, prompting a succession of stories about sales, new management and relocations. Oh, and royalty. Anyway, the collection is fine, but the saga was a reminder that conservation is not just about keeping things alive. You have to keep them alive with enough institutional resilience that they can survive the next crisis.

Taken together, these posts highlight a sometimes overlooked aspect of safeguarding agrobiodiversity. Conservation is not just putting varieties safely into collections, nor, on the other hand, is it just protecting wild populations from destruction. Apples show that the two are connected — or should be. These are, in the jargon, complementary conservation strategies. The diversity in a genebank has a history outside it, and the diversity out in the wild and in farms may only have a future in a genebank. We really do need both, it’s not just mom and apple pie rhetoric.

Wine from the ashes

I’ve been following the vineyards of Pompeii for quite a while, it turns out. Maybe because archaeology and wine are two of my favourite things. As part of our anniversary celebrations, here’s a recap of the story, as it has unfolded on the blog over the past ten years and more. It was prompted by a recent piece by renowned wine writer Jancis Robinson. It’s unfortunately paywalled, but I found another source.

In 2013, I wrote about the vines I encountered growing among the ruins, planted where archaeologists had found evidence of ancient vineyards: casts of vine roots and the supports on which they had grown. The idea was to reconstruct not just a Roman vineyard, but something of the agricultural landscape that disappeared when Vesuvius erupted in AD 79.

By 2016, the experiment had progressed from vines to wine, and we duly Nibbled about it. The Mastroberardino winery was using archaeological evidence, ancient texts and surviving local grape varieties to recreate aspects of Pompeian viticulture. Some of the varieties thought to have been grown in antiquity were still being cultivated around Vesuvius. The reconstructed vineyards were producing wine too, although the winemaking was sensibly not being reconstructed quite as faithfully as the viticulture.

By 2020, the vineyards had become part of the experience of Pompeii itself, with harvesting and winemaking incorporated into the archaeological site’s interpretation of its ancient gardens and agriculture.

And now, in 2026, the project is entering a new phase. A new partnership aims to expand vineyard production within Pompeii, with around 30,000 bottles a year envisaged. The scale is very different from the experimental 1,500 bottles of a decade ago, but the basic idea remains: use archaeology, surviving agricultural biodiversity and modern expertise to recover something of Pompeii’s lost viticultural heritage.

Pompeii died two thousand years ago. It’s rather wonderful that its vineyards have come back to life.

Nibbles: African food systems, Uganda cassava, Uganda pastoralists, Butternut conservation, Seed transfer zones webinar, Frozen Zoo, India fish genebank

  1. Swapping maize for indigenous crops won’t fix African food systems designed around markets and policies that still favour a narrow range of crops.
  2. Cassava is both a food security fallback and a commercial crop in Uganda, but disease, climate change and declining diversity make its conservation an increasingly urgent form of insurance. But what about the markets and policies?
  3. When livestock and crops fail, Ugandan pastoralists draw on wild plants for food, underlining how much food-system resilience still sits outside the formal agricultural system, with its markets and policies.
  4. The Morton Arboretum is using living collections and genetic research to help the threatened butternut tree cope with changing conditions.
  5. Webinar discusses global approaches to seed provenancing and transfer zones, useful for anyone who wants to move native plants without moving the wrong genes. Butternut very interested.
  6. San Diego Zoo Wildlife Alliance’s Frozen Zoo preserves genetic material of plant and animal species that may disappear, from DNA to cells to organisms. Butternut volunteers.
  7. New Indian facility combines ex situ fish conservation with community aquaculture. Good model for much of the above?