Just a quick note to say that Typhoon Rammasun caused some damage at IRRI, but apparently nothing major. The genebank is ok, but the screenhouse used to keep some wild rice plants will clearly have to be repaired. I’m assured that’s going to be a high priority.
Nibbles: BBC series, Pacific breadfruit & yams, Sustainable diets, Cuba atlas, MSB standards, Biofortification on radio, German food scandals, Mexican foods, Non-PC food, CWR interviews, Old Irish sources, ITPGRFA funding, Crop Trust presentations, ISHS, Neural crest and domestication, Wheat genome
- That BBC mega-doc on botany just started.
- PGR News from the Pacific: breadfruit and yams. My former colleagues keeping busy.
- How sustainable is your diet? Here comes the data.
- Cool historical atlas of Cuba has some agricultural stuff.
- The Millennium Seed Bank’s Seed Conservation Standards, final draft.
- Kojo Nnamdi Show on biofortification.
- German sausage and beer industries hit by scandal. What the hell will Luigi survive on?
- Maize beer, maybe. And amaranth.
- Thankfully neither of which have objectionable names.
- Nigel Maxted of University of Birmingham on crop wild relatives.
- His mate and mine Ehsan Dulloo of Bioversity, on the same thing.
- Ancient Irish apples, both wild and cultivated.
- Seed Treaty is short of funds, but they are working on it.
- The Crop Trust is on Slideshare!
- Banana symposium coming up in August.
- A theory of mammal domestication.
- First stab at the bread wheat genome. A tour de force.
Brainfood: Agricultural anthropology special edition, Breeding gourami, FGR indicators, Solanum phenomics, Organic aphids, Restoration genetics, Wild Vigna, Genebanks & genomics
- Tending the Field: Special Issue on Agricultural Anthropology and Robert E. Rhoades. Agrobiodiversity conservation, participatory and collaborative research, and the politics of agricultural development.
- Genetic Diversity of Siamese Gourami from Sumatra, Java and Kalimantan for Selective Breeding of Fish Culture. Yeah, but does it taste nice? Time for some fishicultural anthropology, methinks.
- Global to local genetic diversity indicators of evolutionary potential in tree species within and outside forests. You can’t use indirect indicators of pressure, benefit or response independently of state indicators for genetic diversity. Anyway, here’s a bunch of all of those for you to ponder.
- Conventional and phenomics characterization provides insight into the diversity and relationships of hypervariable scarlet (Solanum aethiopicum L.) and gboma (S. macrocarpon L.) eggplant complexes. High-throughput phenotyping platform built for tomatoes distinguishes between really variable complexes of other solanaceous berries.
- Organic vs. conventional farming dichotomy: Does it make sense for natural enemies? Yes.
- Genes are not information: Rendering plant genetic resources untradeable through genetic restoration practices. Decommodify to commodify. No, really.
- Prioritising in situ conservation of crop resources: A case study of African cowpea (Vigna unguiculata). 9 of 13 priority wild cowpea taxa are likely to be found in protected areas.
- Genebanks and genomics: how to interconnect data from both communities? Beyond databases.
The latest on the Bogia Coconut Syndrome
The main reason for my quick trip to Papua New Guinea last week was to get up to date on Bogia Coconut Syndrome (BCS). Readers with a long(ish) memory may remember that we blogged about this some time back. Quick recap. BCS is a phytoplasma disease first reported about 20 years ago in Yaro Plantation, near Bogia, Madang Province, on the northern coast on PNG.
Since then, it has devastated coconuts in a large contiguous area SE of Bogia, but it has also leap-frogged to a number of sites further along the coast towards Madang and beyond. In 2013, it was spotted in Mobdub, which is only a few kilometres from the Stewart Research Station of PNG’s Cocoa & Coconut Research Institute (CCI), home of COGENT’s International Coconut Genebank for the South Pacific (a collection placed under Article 15 of the International Treaty through a tripartite agreement involving the PNG government, Bioversity on behalf of COGENT and FAO). Here’s Alfred Kembu, the curator of the collection, talking about it in a video by Roland Bourdeix, who used to be the coordinator of COGENT, the global coconut network:
https://www.youtube.com/watch?v=wSADJB4tKXEThere are more videos on the disease and the threat it poses to the collection by COGENT and CIRAD. The closest outbreak to the collection is now about 2 km away. There has been a ban in place in Madang for 3 years now on the movement of nuts that have not been de-husked or are sprouting, as the pattern of movement suggests human agency.
At one of these outbreak sites ((The link will take you to Google Maps.)), first spotted in 2009, the affected area went from a radius of 200 m in 2011 to 1800 m in 2013; all palms are expected to be dead there within 2-5 years. The disease can kill 1-5 palms per month, meaning that a 1 ha plantation can be destroyed in 4 years. This is an extremely dangerous disease for local smallholders, as well as for the genebank. The same phytoplasma is suspected to affect other palm crops, such as oil palm and betel nut, but also banana and possibly others. This photo shows palms at different stages of development of the disease. In the final stage, nothing but the stem is left.
I went to Madang to take part in the inception workshop of the ACIAR-funded project “Bogia Coconut Syndrome in Papua New Guinea and related phytoplasma syndromes: Developing biological knowledge and a risk management strategy,” which is led by Prof. Geoff Gurr of Charles Sturt University, Queensland, Australia. The project activities, which will last four years, center on intensive and repeated surveying and sampling of both plants and insects in a number outbreak areas (in particular for DNA analysis using “loop-mediated isothermal amplification,” or LAMP, which is apparently a method of identifying phytoplasma DNA which is more efficient and cheaper than standard PCR), followed by a series of transmission experiments.
Although the main output will be basic scientific information on BCS (its causal organism, location in the host plant(s), possible alternate hosts, vector(s) etc, none of these are currently entirely clear), a management plan for the disease will also be devised on the basis of the results. The two-day workshop focused on discussing methodological and logistical issues pertaining to the project, which will involve a number of other PNG institutes apart from CCI, but we also talked about the possible relocation of the germplasm collection to a safer locality. Not quite ready for that yet, but we’ll keep working on it. Here is a shot of part of the collection, by the way: talls on the left, dwarfs on the right, cacao in the understory, which is sold to generate some income to help keep the collection going.
We’ll keep you posted…
Nibbles: Prof. Mithen, Commons, Park Grass, Maize genome dupe, Training breeders, Insect-eating fungi, Shea, Teff breeding, Cannabis genome, Organic study, Old sunflower domestication, Rick’s tomatoes
- Developer of super broccoli reflects on his career. With photo of collectors in NSFW shorts.
- Touring the commons of the world. Thankfully no tight shorts in sight.
- Video explaining Rothamsted’s Park Grass experiment. Apparel entirely acceptable, don’t worry.
- Ten million-year-old genome duplication finally came good when ancient farmers domesticated maize.
- Training materials for African breeders to be developed.
- Fungal diversity to the rescue of plants, for a change.
- Africa’s black soap.
- Improving teff. That’s a low bar, I suspect.
- A genome I’m sure we can all get behind.
- Oh dear, that organic meta-analysis “flawed” after all. Will it ever end?
- Rethinking sunflower domestication. An oldie but goldie, which re-surfaced today for some reason. Does anyone know where we are with this now?
- The Deliverance of tomatoes.