How to rescue a sunflower wild relative

A paper by Jennifer R. Ellis and David E. McCauley of Vanderbilt University, just out in Biological Conservation, tries to answer a couple of quite controversial questions for conservationists: ((Ellis, J., & McCauley, D. (2009). Phenotypic differentiation in fitness related traits between populations of an extremely rare sunflower: Conservation management of isolated populations. Biological Conservation. DOI: 10.1016/j.biocon.2009.03.029)) How do you prioritize populations for conservation? And when does genetic pollution become genetic rescue? Both answers depend on something most gene-jockeys don’t do much of: growing plants and seeing how they perform.

To add piquancy, the paper deals with a crop wild relative, and a very rare one at that: Helianthus verticillatus, which is known from only four sites in the southeastern United States. The authors worked on populations from two of these, in Tennessee (fewer than 100 individuals) and Alabama (several hundred individuals). They collected seeds from sixteen of what they had previously identified as genetically distinct individuals from each population, and then made a whole bunch of crosses, both within populations and also between the two populations, for two generations. They grew the progeny of these crosses in the same environment and measured how well they did in terms of fruit viability, germination, survival and pollen quality.

So, first, to the prioritization question. Genetic markers are now routinely used to identify populations that are particularly low in diversity and thus in need of immediate in situ protection or collecting for ex situ conservation. Often, genetic diversity is positively correlated with fitness, but this is not always the case. For H. verticillatus, in fact, it was known from previous marker studies that the two populations had comparable levels of genetic diversity and only moderate genetic differentiation. However, the results of the common environment study on the offspring of the intra-population crosses showed that they different significantly in their overall “fitness,” with the Tennessee material having lower germination rates and fruit viability. In other words, molecular markers on their own would not have raised a particular concern about the long-term viability of the Tennessee population. In the words of the authors, “contrary to genetic marker information, these populations are not interchangeable with regard to quantitative fitness characters.”

Next, the genetic rescue question. The conventional wisdom of course is that conservation should strive to maintain the genetic integrity of populations. Bringing in material from elsewhere constitutes genetic pollution and is BAD. The introduction of new genetic material into relatively homogeneous populations with low fitness can of course result in heterosis and increased fitness. But it can also lead to lower fitness — inoutbreeding depression — “owing to the dilution of local adaptations or disruption of co-adapted gene combinations.” Enter the inter-population crosses. Crossing Tennessee individuals with those from Alabama resulted in offspring that were more fit, with no sign of outbreeding depression, at least for the two generations of the study. This “offers great promise” as an active conservation strategy for the Tennessee population, the authors say.

Given people’s sqeamishness about messing around with rare species, I wonder if such activism will be given a chance.

Melaku Worede speaks

And this is what the veteran crop conservationist says:

Gene banks like the SADC gene bank, the Svalbard gene bank, and many others, focus only on collecting and preserving. How can you think you are conserving diversity when the very source upon which the seeds depend is not included? You can capture only so much, and in 100 years it will be useless because the planet will have changed. Perhaps you will be able to incorporate some genetic material into varieties and release them, but who is going to benefit from that? That is the big question.

I know what he means. You need to conserve the process, as well as the product. But I have another big question. If the world — read the climate — is changing as fast as many now fear, don’t you need the insurance policy that genebanks provide all the more?

GMO introgression risk mapped

Bioversity International’s Gene Flow Risk Assessment of Genetically Engineered Crops project, funded by GTZ and realized in collaboration with CIAT and Universidad del Valle (Cali, Colombia), has got (some of) its products out. The project focused on the “likelihood of gene flow and introgression to crop wild relatives (CWR) and other domesticated species.” A book is coming, but you can see the risk maps for a number of crops online now. And there’s also a bibliography.

LATER: Jeremy points out, correctly, that “see” in the last sentence above is a bit of an overstatement. You need to do a bit more work than is perhaps implied.