- Recent land use and management changes decouple the adaptation of livestock diversity to the environment. The diversity of traditional livestock breeds used to be closely related to climate in Spain, but this is breaking down.
- Rationalizing ex situ collection of reproductive materials for endangered livestock breed conservation. Also in Spain, so I hope these guys are talking to the above.
- Applying the zoo model to conservation of threatened exceptional plant species. Not to mention livestock in Spain? Basically talking about a pedigree-based approach.
- Selection and drift reduce genetic variation for milk yield in Manech Tête Rousse dairy sheep. A bit like this (see above)?
- Influence of land tenure interventions on human well-being and environmental outcomes. Fairly good evidence from meta-review that formal titling has good social and environmental outcomes. But what did it do for traditional breeds, right?
- Lipid residues in pottery from the Indus Civilisation in northwest India. Not as much dairy as thought, and mainly non-ruminant fats. Definitely traditional breeds though.
- Ancient proteins provide evidence of dairy consumption in eastern Africa. Starting when lactase persistence was still rare or absent.
- Genome-scale sequencing and analysis of human, wolf and bison DNA from 25,000 year-old sediment. Sediment? Yep, sediment.
- Effect of dry heat on seed germination of Desmodium and Stylosanthes species. Could be used rather than mechanical scarification, thus saving time and effort. Livestock gotta eat.
Brainfood: Sweet cassava, Iranian wheat, Wild tomato, Ethiopian sorghum, Portuguese beans, Wild Algerian oats, Angolan Vigna, Apple tree, Regeneration, Robusta climate, Bronze Age diets, Maize domestication, Veld fruits, Red yeasts, Remote sensing
- Large‐scale genome‐wide association study, using historical data, identifies conserved genetic architecture of cyanogenic glucoside content in cassava (Manihot esculenta Crantz) root. Two loci explain about a third of variation in HCN content.
- Strategic use of Iranian bread wheat landrace accessions for genetic improvement: Core set formulation and validation. Not much structure, but some accessions are good for multiple traits.
- Population studies of the wild tomato species Solanum chilense reveal geographically structured major gene-mediated pathogen resistance. Not all populations of a crop wild relatives will be equally useful in breeding.
- Genetic diversity of Ethiopian sorghum reveals signatures of climatic adaptation. 12 sub-populations, with about 10% of the variation explained by either agroecology or geography.
- Common bean SNP alleles and candidate genes affecting photosynthesis under contrasting water regimes. And all in just 158 Portuguese accessions.
- Genetic Diversity and Population Structure of Algerian Endemic Plant Species Avena macrostachya Bal. ex Cross. et Durieu. Collecting sites need to be visited again. I can vouch that doing so would be very interesting.
- Conservation priorities for African Vigna species: Unveiling Angola’s diversity hotspots. It’s a huge collecting gap.
- Remote sensing enabled essential biodiversity variables for biodiversity assessment and monitoring: technological advancement and potentials. The Remote Sensing enabled Essential Biodiversity Variables are a work in progress. Would like to see it applied to those Vignas.
- Genomic consequences of apple improvement. …are relative genetic uniformity.
- Genome-Wide DArTSeq Genotyping and Phenotypic Based Assessment of Within and Among Accessions Diversity and Effective Sample Size in the Diverse Sorghum, Pearl Millet, and Pigeonpea Landraces. Optimal sample size for regeneration of genebank accessions varies from 50-200 among crops.
- Not so robust: Robusta coffee production is highly sensitive to temperature. Looking at historical production data from 800 farms in SE Asia suggests optimal temperature is below 20°C, a lot lower than suggested by the species’ home range in the Congo Basin.
- Exotic foods reveal contact between South Asia and the Near East during the second millennium BCE. Bronze Age Levantines ate bananas and soya, according to dental calculus. No word on coffee.
- Archaeological Central American maize genomes suggest ancient gene flow from South America. Pre-domesticated maize was taken to South America, where is was finished off away from introgression from pesky wild relatives, and then taken back home.
- Fruits of the Veld: Ecological and Socioeconomic Patterns of Natural Resource Use across South Africa. South Africans collect and eat a lot of wild fruits, but could plant and eat them more.
- Exploring the Biodiversity of Red Yeasts for In Vitro and In Vivo Phenotypes Relevant to Agri-Food-Related Processes. Which is interesting because they can delay food spoilage and also provide nutritional supplements. Though personally I’d prefer veld fruits.
Brainfood: Topical forages, Ne, Pearl millet nutrition, Sorghum strategy, Tillering rice, Exchanging wheat, Recollecting wheat, Yeast domestication, Amazonian maize, Synthesizing groundnut, Strawberry dispersal, Soya structure, Remote change, Green Revolution, Unintended consequences
- Tropical forage technologies can deliver multiple benefits in Sub-Saharan Africa. A meta-analysis. Including improved germplasm, which had on average 2.6 times higher herbage productivity than local controls.
- Effective population size remains a suitable, pragmatic indicator of genetic diversity for all species, including forest trees. Which is good because you can estimate it fairly easily. Well, kinda. It’s important because it’s one of the Genetic diversity targets and indicators proposed for the CBD post-2020 Global Biodiversity Framework.
- Exploring the genetic variability and diversity of pearl millet core collection germplasm for grain nutritional traits improvement. 15 of 212 accessions are good for multiple nutrients.
- Global Status of Sorghum Genetic Resources Conservation. The two biggest collections are updating their data.
- Genomic basis of geographical adaptation to soil nitrogen in rice. Rice lost high tillering in high N conditions, but can get it back to cope with low N conditions.
- The Economic Impact of Exchanging Breeding Material: Assessing Winter Wheat Production in Germany. It really pays for breeders to exchange material.
- Comparative analysis of the gene pool structure of Triticum aethiopicum wheat accessions conserved ex situ and recollected in fields after 85 years. Vavilov’s collections are more diverse.
- Evidence for Two Main Domestication Trajectories in Saccharomyces cerevisiae Linked to Distinct Bread-Making Processes. Being adapted for industrial and artisanal baking respectively.
- Entrelaçado, a rare maize race conserved in Southwestern Amazonia. Gap-filling pays off. Hope we can re-collect it in 85 years’ time.
- ValSten: a new wild species derived allotetraploid for increasing genetic diversity of the peanut crop (Arachis hypogaea L.). Playing God with peanuts.
- Long-distance dispersal of the beach strawberry, Fragaria chiloensis, from North America to Chile and Hawaii. For the birds.
- Genetic architecture of wild soybean (Glycine soja Sieb. and Zucc.) populations originating from different East Asian regions. At least 3 separate groups, and the collection stored in Korea is pretty representative.
- Supporting habitat conservation with automated change detection in Google Earth Engine. Fancy math can detect land use change quickly and accurately.
- Health Impacts of the Green Revolution: Evidence from 600,000 births across the Developing World. Modern varieties reduced infant mortality by 2.4–5.3 percentage points (from 18%), with stronger effects for male infants and among poor households. Why we do all of the above?
- Articulating the effect of food systems innovation on the Sustainable Development Goals. Yeah, not so fast…
Brainfood: WCR, Parasites, Wild tomato, Wild olive, MAGIC, ART cooking, Payments for conservation, ICARDA barley, Canary barley, Enset, Mexican relicts, Data management, Bumblebee map
- Resistance and Tolerance to Root Herbivory in Maize Were Mediated by Domestication, Spread, and Breeding. Domestication and spread decreased maize resistance to Western corn rootworm, but breeding increased it.
- Does genetic diversity protect host populations from parasites? A meta‐analysis across natural and agricultural systems. Yes, but it depends. Western corn rootworm unavailable for comment.
- Genome of Solanum pimpinellifolium provides insights into structural variants during tomato breeding. Lots of variants in regulatory genes for agronomic traits, compared to domesticated lines.
- Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.). There was a domestication bottleneck back in the day, but that was almost wiped out by later repeated introgression from the wild relative as the crop spread. So quite different from the above maize and tomato cases?
- Multi-parent populations in crops: a toolbox integrating genomics and genetic mapping with breeding. Not just good for QTL mapping any more, but you need a whole package of stuff for them to be useful to breeding programmes.
- Current uses of Andean Roots and Tuber Crops in South American gourmet restaurants. None of the chefs interviewed knew of mauka, but it’s not their fault.
- Payments for agrobiodiversity conservation services: An overview of Latin American experiences, lessons learned and upscaling challenges. Conserving in situ 100 varieties on 5 hectares each would cost US$70,000 p.a. Maybe useful for mauka? But will chefs pay?
- Genetic and agro-morphological diversity in global barley (Hordeum vulgare L.) collection at ICARDA. Under heat stress, though, which is the important bit left out of the title. Unclear if any of the material was from the Canaries (see below), but I can find out if anyone’s interested. Come to think of it, I’m kinda interested myself…
- An Evolutionary Approach to the History of Barley (Hordeum vulgare) Cultivation in the Canary Islands. You can apparently infer historical extents of cultivation on different islands in the archipelago, as well as the timing of separation of populations, which is pretty amazing. No word on representation in rock art though (see below).
- Enset (Ensete ventricosum) and the Archaeology of Southwestern Ethiopia. Information comes mainly from megalithic and rock art sites, which is pretty amazing. No word on genetic relationships, at least in this paper. Do you need me to link to previous Brainfoods on enset? No, of course you don’t, you know how to search the archive. You just put your lips together, and
whistleblow (kudos to whoever quotes the reference in the comments first). - Relict Plant Communities at Prehispanic Sites in Oaxaca, Mexico: Historical Implications. Ancient native Mexicans really liked succulents around their settlements. Well, who wouldn’t, when all is said and done?
- To clean or not to clean: Cleaning open‐source data improves extinction risk assessments for threatened plant species. Clean. Always clean. And then clean again.
- Global Patterns and Drivers of Bee Distribution. Hope they cleaned the data or this unusual double-humped diversity pattern could be in trouble, and that would be a pity.
Nibbles: Tea podcast double, African soil map, Chinese seeds
- Tea, anyone? Jeremy delves into how Brits made tea, and vice versa.
- More tea? Lawrie Taylor looks at the dark side.
- Want to know what the soil is like on African tea farms? Try iSDAsoil. Let the mashing up with crop accession locality data begin…
- Want to know what happened to those other seeds that came out of China?