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Summarizing livestock domestication

You want a rapid gallop through what we have learned about livestock domestication from molecular markers? Here it is, courtesy of Groeneveld et al. Deep breath…

For all domestic species, mtDNA data have allowed the elucidation of the relationships with wild ancestor species, and for most species it is also informative at the intercontinental level… Sheep, goats, and taurine cattle (Bos taurus) are presumed to have been domesticated in Southwestern Asia. The Indus valley has been proposed to be the site of domestication of indicine cattle and the river type of water buffalo, while the swamp type of water buffalo is thought to have originated in the Yangtze valley. The domestication of pigs is considered to have happened across Eurasia and Eastern Asia in at least seven separate events involving both European and Asian subspecies of boar. The Yak is presumed to be the result of a single domestication event in China/Tibet with at least three maternal lineages contributing to the ancestral yak gene pool. Domestic chickens are thought to be the result of multiple domestication events, predominantly of Red jungle fowl (Gallus gallus) in Southeastern Asia and possibly also involving Gallus sonneratii and maybe Gallus lafayettii. Horses were domesticated in a broad area across the Eurasian steppe, and in this species the husbandry style has left considerable signatures. It is presumed that mares were domesticated numerous times, but that only a few stallions contributed to the genetic make-up of the domestic horse. The last finding illustrates the use of Y-chromosomal haplotypes as a marker for mammalian patrilines. This is still limited by the identification of haplotypes, but probably has the same potential as in human population genetics.

Quite a tour de force, I think you’ll agree. Read the paper itself for trenchant summaries of the results of literally dozens of molecular studies on these species, describing the relationships among breeds and geographic patterns in diversity. But if you’re just interested in the general principles, here they are:

  • There is evidence of multiple domestication events for most species.
  • These often involved more than one ancestor species or subspecies and
  • repeated introgression events of closely related ancestor species.
  • Genetic variability declines with increasing distance from centres of domestication.
  • All species show strong geographic structure in genetic diversity, except sheep.
  • Most of the genetic diversity is present within a breed and not between breeds.

The most interesting thing to me is the geographic structure, and the one thing the paper doesn’t do in any great detail is compare and contrast the patterns found in the different species. I mean, are horse breeds from Iberia more distinct from other European horse breeds than its cattle breeds are from other European cattle breeds, say? And if so, why? The paper describes the patterns found in each species, but doesn’t set them side-by-side, as it were. Once someone does that, we can go on to compare them with what we know about crops…

Livestock biodiversity and conservation gets a global view

Animal Genetics has a Special Issue on “A Global View of Livestock Biodiversity and Conservation,” coordinated by Paolo Ajmone-Marsan and Licia Colli. It includes a review of genetic diversity in farm animals, and an assessment of what climate change means for the characterization, breeding and conservation of livestock. It’s all because of a 3-year EU project called GLOBALDIV.

It is formed by a core group of partners who participated in past EU or continental scale projects on Farm Animal Genetic Resources characterization and conservation. It also involves a much larger number of experts that are actively contributing to the success of the initiative. The project aims at improving the conservation, characterisation, collection and utilisation of genetic resources in agriculture in EU and beyond, complementing and promoting work undertaken in the Member States at the Community level and facilitating co-ordination of international undertakings on genetic resources in agriculture.

As one of the more info-savvy CG Centres, ILRI will no doubt have comments and analysis online very soon.

I got the news via Twitter.

Hairy pig hits limelight

They don’t say whether it is the famous Lincolnshire Curly Coat, but it looks like it might be. ((Or maybe it’s a Mangalitsa, from Hungary.)) Now, if only they could make them pocket-sized

Thanks, Cary.

UPDATE (17 Fe. 2016): Well, “they” were the LA Times, and both the story and video to which we linked back in 2010 are no more. But the “sheep pig” in question probably was the Mangalitza, and the story of how it was rescued from oblivion is actually pretty cool.