- A critical review on the utility of DNA barcoding in biodiversity conservation. Not bad, but not by itself.
- A whole genome DArT assay to assess germplasm collection diversity in common beans. It works, and can distinguish Andean from Mesoamerican accessions.
- Optimization of a SNP assay for genotyping Theobroma cacao under field conditions. It works, and is being used in Ghana.
- A Global Assessment of Salmon Aquaculture Impacts on Wild Salmonids. Meta-analysis shows farming salmon and trout in an area has in general been bad for their wild relatives there.
- Genome-wide selection in cassava. High correlations between SNPs and several phenotypic traits of interest to breeders mean that selection time could be cut by half. Could.
- Cereal landraces genetic resources in worldwide GeneBanks. A review. We don’t have enough data. On so many different levels.
- Coevolutionary genetic variation in the legume-rhizobium transcriptome. Wait, does this mean we should be conserving Rhizobium too?
Brainfood: Agronomy, Endophytes, Breadfruit morphology, Setaria genetic diversity, Yeast epigenetics, Wild rice
- Avenues to meet food security. The role of agronomy on solving complexity in food production and resource use. Wait, what, it’s not all about the breeding?
- Population studies of native grass-endophyte symbioses provide clues for the roles of host jumps and hybridization in driving their evolution. Wait, what, we have to conserve these things too now?
- Morphological diversity in breadfruit (Artocarpus, Moraceae): insights into domestication, conservation, and cultivar identification. Cool, we now have a multi-access Lucid key to help us recognize varieties.
- Geographical variation of foxtail millet, Setaria italica (L.) P. Beauv. based on rDNA PCR–RFLP. Geographic differentiation, centre in East Asia, evidence of migration, yada yada.
- Within-genotype epigenetic variation enables broad niche width in a flower living yeast. Wait, what, now we have to document the epigenome too?
- Phylogeography of Asian wild rice, Oryza rufipogon: a genome-wide view. Fancy markers come through where lesser breeds caused confusion. Two groups, clinally arranged, with the China-Indochina group close to indica, neither close to japonica. So one, Chinese, domestication event, yada yada.
Nibbles: Coconut origins, Microbe genebank, Stay-green barley, Sachs may suck, Cap in hand, Wheat information, IITA birthday, Cat art, Poppy biosynthesis, Correcting names
- Coconut origins, the quick version.
- Chile gets a bugbank.
- Stay-green barley genes located. In a genebank collection, natch. What now, a Stay-green Revolution?
- New Economist blog agnostic about Millennium Villages.
- Plant scientists call for $100 billion investment in, er, plant science.
- Wheat pedigrees online.
- IITA a youthful 45.
- Cats in Islam.
- Noscapine production in poppies is complex, but not so complex that boffins can’t figure it out.
- Want help in getting taxonomic names right? What you need is the Taxonomic Name Resolution Service. Does that mean we don’t need this any more?
Nibbles: GIBF, Identifiers, Farming animals, Geomedicine, Seed saving, Seeds of Success, CWRs, CORA 2012, Sourdough culture bank, Phenology, Wild Coffea, Cassava conference, Condiments, Gulf truffles, Cashew nut, Home gardens, Tea, Bacterial diversity
- GIBF taxonomy is broken. We’re doomed. No, but it can be fixed. Phew.
- Maybe start with a unique identifier for taxonomists? Followed by one for genebank accessions… Yeah. Right.
- Domesticating animals won’t save them. And more on the commodification of wildlife. Is that even a word?
- Geomedicine is here. Can geonutrition be far behind? We’re going to need better maps, though.
- Saving heirlooms, one bright student at a time.
- “Botanists Make Much Use of Time.” If you can get beyond the title, there’s another, quite different, but again quite nice, seed saving story on page 3.
- “Why aren’t these plants the poster children [for plant conservation]?” You tell me.
- Or, instead of doing something about it, as above, we could have a week of Collective Rice Action 2012.
- You can park your sourdough here, sir.
- How Thoreau is helping boffins monitor phenology. But there’s another way too.
- “She drinks coffee. She farms coffee. She studies coffee.” Wild coffee.
- Massive meet on the Rambo Root. Very soon, in Uganda.
- Ketchup is from China? Riiiight. Whatever, who cares, we have the genome!
- And in other news, there are truffles in Qatar. But maybe not for long.
- The weirdness of cashews.
- The normalcy of home gardens as a source of food security — in Indonesia.
- Ok, then, the weirdness of oolong tea.
- Aha, gotcha, the normalcy of office bacterial floras! Eh? No, wait…
Brainfood: Bee diversity, Fodder innovation, African agrobiodiversity, Quinoa economy, Fragmentation and diversity, Rice in Madagascar, Rice in Thailand
- Management increases genetic diversity of honey bees via admixture. No domestication bottleneck there!
- Enhancing innovation in livestock value chains through networks: Lessons from fodder innovation case studies in developing countries. Fodder innovators of the world, organize. If you don’t, you will lose your value chains.
- Introduction to special issue on agricultural biodiversity, ecosystems and environment linkages in Africa. Special issues? What special issue?
- The construction of an alternative quinoa economy: balancing solidarity, household needs, and profit in San Agustín, Bolivia. Despite the allure of fancy denominations of origin and the like, old-fashioned cooperatives, and the much-maligned intermediary, manage to hang on in there.
- Species–genetic diversity correlations in habitat fragmentation can be biased by small sample sizes. Can.
- The original features of rice (Oryza sativa L.) genetic diversity and the importance of within-variety diversity in the highlands of Madagascar build a strong case for in situ conservation. Actually the way I read it, the stronger case is for ex situ. But see what you think.
- Population structure of the primary gene pool of Oryza sativa in Thailand. In situ Strikes Back.