- Relationships between agrobiodiversity, dietary diversity and nutritional status in Tanzania. It’s really complicated.
- Microsatellite genotyping of medieval cattle from central Italy suggests an old origin of Chianina and Romagnola cattle. DNA from a couple of cattle breeds from central Italy shows remarkable similarities with that from thousand-old bones from an archaeological site in the same area.
- Strategies and approaches to sustainable livestock production in Sub Saharan Africa. It will depend on women.
- Strategies and initiatives on rice genetic resources conservation and research for climate change adaptation. Among the 1506 traditional rice varieties in the Philippines genebank are 3 which could be drought tolerant and 9 collected from really saline areas. They’re being sequenced for gene discovery.
- Next generation variety development for sustainable production of arabica coffee (Coffea arabica L.): a review. Local breeding, plus international networking.
- Why biodiversity declines as protected areas increase: the effect of the power of governance regimes on sustainable landscapes. Modelling shows land-sharing may outperform land-sparing in the long run. Most interesting consequence of the insights derived is that perhaps protected areas should be placed near agricultural frontiers rather than where biodiversity or cost-effectiveness highest.
- Biodiversity and selection for scrapie resistance in goats: genetic polymorphism in “Girgentana” breed in Sicily, Italy. Resistance gene more common in this weird breed than in the one that’s usually used in breeding.
- Reassessing the evolutionary history of ass-like equids: Insights from patterns of genetic variation in contemporary extant populations. I urge you to read the abstract yourselves and marvel at the author’ success in using the word ass-like the maximum possible number of times.
- Opinion paper: emerging markets, emerging strategies under the genomic revolution. Genomic selection is an organizational revolution as much as a technological one. At least in animal breeding.
- Genetic diversity of Eucalyptus camaldulensis Dehnh. following population decline in response to drought and altered hydrological regime. It stayed the same, I guess because of gene flow.
- Significance and value of non-traded ecosystem services on farmland. Value of biological control of pests and nitrogen mineralisation provided by organic agriculture of peas, beans, barley and wheat (extrapolated from 20 fields in NZ to whole of temperate zone) was greater than global costs of insecticides and fertilizers, even if only 10% of global arable area was converted to organic.
Brainfood: Identifying accessions, Evaluating yeasts, Using CWR, Wild grapes, Bushmeat and nutrition, Rice evaluation, Tomato characterization, Sugarcane CWR, Nordic livestock, Conservation optimization, Moringa development, Albanian olives
- High-throughput genotyping for species identification and diversity assessment in germplasm collections.. 9% of random Brassicaceae samples from Australian Grains Genebank misidentified to species, with some interspecific hybrids.
- Methodology for enabling high-throughput simultaneous saccharification and fermentation screening of yeast using solid biomass as a substrate. Everything is now, now, now these days.
- Utilization of wild relatives of wheat, barley, maize and oat in developing abiotic and biotic stress tolerant new varieties. Useful summary table at the end.
- Patterns of SNP distribution provide a molecular basis for high genetic diversity and genetic differentiation in Vitis species. Different grape species are really different.
- Disentangling the relative effects of bushmeat availability on human nutrition in central Africa. Both rational use of some wild mammals for nutrition, and conservation of more vulnerable species, are possible, though in different places.
- Blast Resistant Genes Distribution and Resistance Reaction to Blast in Korean Landraces of Rice (Oryza sativa L.). Conventional evaluation of landraces is useless; you really need to look at the genes.
- Characterization of a collection of local varieties of tomato (Solanum lycopersicum L.) using conventional descriptors and the high-throughput phenomics tool Tomato Analyzer. Brave new world.
- Phylogenetic analysis of Saccharum s.l. (Poaceae; Andropogoneae), with emphasis on the circumscription of the South American species. Allopolyploid, with 2 species belonging in a different genus.
- Utilization of farm animal genetic resources in a changing agro-ecological environment in the Nordic countries. Need to phenotype and genotype everything. Now where have I heard that before?
- Multi-objective optimization for plant germplasm collection conservation of genetic resources based on molecular variability. Lots of data plus fancy maths can tell you which individuals you should add to an ex situ collection to maximize conserved diversity.
- Actual and Potential Applications of Moringa stenopetala, Underutilized Indigenous Vegetable of Southern Ethiopia: A Review. Potential as a source of drugs, but you need to learn to grow it.
- Olive in the story and art in Albania. There are old olive trees around castles.
Nibbles: Genebank data, Edible smut, Edible bugs, Healthful bluberries, Mining Indian food, Funny spuds pix, Old grape pits, Old einkorn stash, Phylogeny & conservation double, Rhizobacteria, Rapid phenotyping, Plata periurban ag, BRICs in Africa, Chinese terraces, SMTA
- GRIN-Global comes to Portugal. That makes two.
- Eating fungi.
- Eating bugs.
- Eating Indian.
- Eating blueberries is good for you.
- Would you eat these funny-looking potatoes?
- Veg ink.
- Old grape seed in Israel.
- Old einkorn seed in England.
- Atlas of Living Australia to include phylogenetic data. Kew thinking along same lines too.
- Grasses can absorb organic N. With some help.
- “Today’s international scientific community is dominated by big mercenaries who change their teams’ research subjects to get on the cover of Nature.” But INRA isn’t like that, apparently, at least with regards to high-throughput phenotyping.
- Argentinian periurban farmers grow varieties they like to eat. Well, it’s good to have the data.
- Rounding up China and Brazil in African agriculture.
- Meanwhile, back home, famous rice terraces are being used to grow maize.
- SMTA 101.
Brainfood: Grape genetics & conservation, Ecosystem restoration & services, Collecting cycads, Pigeonpea genomics, Wild pigeonpea gaps, Breadfruit collection diversity, Banana collection diversity, Conserving mammals, Bhutanese cereal diversity, Potato nutrition
- The preservation of genetic resources of the vine requires cohabitation between institutional clonal selection, mass selection and private clonal selection. Intra-varietal diversity, that is. They apparently do it best in Portugal.
- Association of dwarfism and floral induction with a grape ‘green revolution’ mutation. Cool things I learned from this paper: 1. Pinot Meunier is a periclinal mutant. 2. Tendrils are inflorescences. 3. Dwarf grapes are dwarf for the same reason dwarf wheat is dwarf. No word on what the Portuguese are doing about it. And the fact that the paper is over 10 years old is irrelevant to its coolness.
- Quantifying the impacts of ecological restoration on biodiversity and ecosystem services in agroecosystems: A global meta-analysis. Supporting ecosystem services go up 40% on average, regulating ES by 120%. Well worth having.
- Can a Botanic Garden Cycad Collection Capture the Genetic Diversity in a Wild Population? Yes, but need to “(1) use the species biology to inform the collecting strategy; (2) manage each population separately; (3) collect and maintain multiple accessions; and (4) collect over multiple years.” Maybe they should talk to the Xishuangbanna Tropical Botanical Garden guys.
- Genebanking Seeds from Natural Populations. It’s more difficult than with crops. And then you’ve got the above.
- Genomics-assisted breeding for boosting crop improvement in pigeonpea (Cajanus cajan). “…pigeonpea has become a genomic resources-rich crop and efforts have already been initiated to integrate these resources in pigeonpea breeding.” And now we wait.
- Crop wild relatives of pigeonpea [Cajanus cajan (L.) Millsp.]: Distributions, ex situ conservation status, and potential genetic resources for abiotic stress tolerance. 15 of them need collecting. And, presumably, genotyping (see above).
- Diversity in the breadfruit complex (Artocarpus, Moraceae): genetic characterization of critical germplasm. 349 individuals from 255 accessions are 197 unique genotypes from 129 lineages.
- Musa spp. Germplasm Management: Microsatellite Fingerprinting of USDA–ARS National Plant Germplasm System Collection. Used to identify mislabelled in vitro accessions. Data in GRIN-Global.
- Education and access to fish but not economic development predict chimpanzee and mammal occurrence in West Africa. Having fish to eat means you leave chimpanzees alone.
- Community Perspectives on the On-Farm Diversity of Six Major Cereals and Climate Change in Bhutan. About 30% of varieties lost over last 20 years. But what does it mean that “93% of the respondents manage and use agro-biodiversity for household food security and livelihood”? What exactly does that other 7% of farmers do?
- Amino acid composition and nutritional value of four cultivated South American potato species. S. goniocalyx is best for you. But does it taste any good?
Nibbles: Year of the Goat, Nutritional guidelines, Healthy diets, IK & conservation, Healthy orchards, Indian endemics trouble, CWR garden, NGS & food security, 3000 rice genomes at work, C4 rice, It’s economics stupid, US animal products map, Milk production history, Old Chinese cheese, Old Arabian seashells by the seashore, Gordon Bleu insects, African agriculture visions, Agroecology conference report, Smallholder diversity, Seed systems project, Supermarket farms, Toronto beer, Herbs factsheets, Ecosystems map, Contested Agronomy
Sorry about no blogging last week. Was watching sausages being made. Here’s a quick roundup of most of the stuff I would have Nibbled.
- But first of all, Happy Year of the Ram, everyone. No, wait…
- Brazil has the best nutritional guidelines.
- But Chad the best diet. Both are kinda ironic.
- Well, what can governments do about supporting healthy food preferences anyway?
- Folk knowledge vital to conservation.
- Well I never, say the East Timorese.
- Farming in a national park can be a win-win.
- Maybe even a win-win-win, if cider apples are involved.
- India’s endemic plants could be in trouble. Many crop wild relatives among them?
- Maybe they should do what the Royal Horticultural Society will be doing at the Malvern Spring Festival and make a garden with crop wild relatives. But then it won’t be the world’s first.
- Next generation genomics is this generation’s jetpack.
- No, wait, here’s that jetpack you’ve been expecting for so long… Well, more the first concept of the assembly instructions, really.
- We’ll get that jetpack before C4 rice, I expect. But we will get both.
- But of course it’s not all about production anyway.
- Squid is Rhode Island’s most lucrative animal product. Otherwise it’s mainly milk, in that part of the US.
- Maybe cheese was the Taklamakan’s. Three thousand years ago. And sea molluscs Saudi Arabia‘s. Five thousand years ago.
- When and where will insects be.
- “Large-scale investment in African agriculture and agribusiness, whether foreign, domestic, private, government-backed, or a combination of these, could pay a vital role in providing urgently needed financing, technology and markets, thereby assisting to ensure food security, contributing to poverty reduction and propelling agriculture-driven growth, with significant implications for achieving more inclusive growth.” Is that really all one sentence?
- Or maybe small-scale investment?
- How much investment in agroecology will there be, I wonder. Even after this report from last year’s FAO conference.
- Oh good, 75% of crop diversity still on small farms. Would that be 75% of the 25% remaining from the last century?
- What effect will the Integrated Seed Sector Development Project Africa have on that 75%, I wonder.
- The farm as a supermarket. Almost makes you believe in that 75%.
- The beery history of Toronto. Yes, Toronto.
- The National Center for Complementary and Integrative Health (NCCIH) has nutritional fact sheets on herbs.
- A great new global ecosystem map has the GIS nerds all excited.
- “Contested Agronomy 2016 is a conference about the battlefields in agricultural research, past and present.” Oh to have the live-tweeting gig. Hell, I’d do it for free. Wait, don’t I already do it for free? Hasn’t this whole Nibbles been about contestation in agricultural development?
And on that note, that’s all folks. Because this was such a pain to put together after a week’s hiatus, I’m going to leave it on the front page for a day or two before sending it to the Siberia of the sidebar. Oh and BTW, people. We want to reach 6,000 followers on Twitter, preferably before that jetpack arrives, so follow us already, and tell your hipster friends.
Wait, too needy?